Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0796 ATGGCTTATTACCGTATTCTCTTCCTCTTATTCCTTACCCTTCCTTTCTCTTCAGCCAAACTAACCCTTGATTACTACAAAGCAACATGCCCTGACTTTGAAAAAATTGTAAGAGAAAACGTGTATATCAAGCAAAGTGTTGTTCCGGCCACCGCACCGGGCCTCCTCCGAATGTTCTTCCATGATTGCATCACAGATGGTTGTGACGCTTCTATCTTTATCTCCTCAAGTGCCTATAACCCTCATACAGAGCGTGATGCTGACCTTAACCTCTCCCTCTCCGGTGATGCATTTGACATTGTTTCGAAGATCAAGAATGCCCTAGAGCTAGCATGCCCTGGAATTGTTTCATGCTCAGACATTCTTGCACAAGCCACAAGGGACCTTGTTAAGATGGTTGGTGGGCCATATTATAAAGTGAGGTTAGGGAGAAAGGATAGTAAAGTTTCTGATGCTAAAAGAGTTGATGCTAATCTTCCAACTACAAAGATGACAATGGATCAAATCATTGATAAATTCACTGTGAAGAATTTCACTATTAGAGATATGGTTGCTTTAACTGGTGCACACACCATTGGGTTCACACATTGCAAGGAATTCATTGATAGGATCTACCCTATAGTTGACCCTACCCTACACCCAAAGCTTGCTGCTGGTTTGAGACAAATTTGCCAGAACTACACTTTGGATACATCAATGGCAGCTTTCAATGATGTAAGGTCACCAAGCACTTTTGACAATGCATTCTTCAAGAATATCCTCAAAGGGTTAGGGCTATTGACCACAGATTATTTTTTGAGTGTTGACCCAAGGACAAGGCCAATTGTGGAGGAATATGCAAAAGATCAGCAAGCATTCTTTGTAGATTTTGCAAAGGCAATGGAGAAGGTTTCTGTGTTGGGAGTGAAAACTGGTAATAAAGGAGAAGTGAGGAATAGGTGTGACCAATTCAACAATAATATTCATGCATAA 972 0.4115 MAYYRILFLLFLTLPFSSAKLTLDYYKATCPDFEKIVRENVYIKQSVVPATAPGLLRMFFHDCITDGCDASIFISSSAYNPHTERDADLNLSLSGDAFDIVSKIKNALELACPGIVSCSDILAQATRDLVKMVGGPYYKVRLGRKDSKVSDAKRVDANLPTTKMTMDQIIDKFTVKNFTIRDMVALTGAHTIGFTHCKEFIDRIYPIVDPTLHPKLAAGLRQICQNYTLDTSMAAFNDVRSPSTFDNAFFKNILKGLGLLTTDYFLSVDPRTRPIVEEYAKDQQAFFVDFAKAMEKVSVLGVKTGNKGEVRNRCDQFNNNIHA 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0796 323 PANTHER - 6 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal12g0796 323 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal12g0796 323 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal12g0796 323 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal12g0796 323 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal12g0796 323 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal12g0796 323 Gene3D - 24 318 - -
Lal12g0796 323 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal12g0796 323 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal12g0796 323 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal12g0796 323 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal12g0796 323 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal12g0796 323 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal12g0796 323 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal12g0796 323 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal12g0796 323 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal12g0796 323 SUPERFAMILY Heme-dependent peroxidases 21 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lal12g0796 323 CDD secretory_peroxidase 20 317 IPR033905 GO:0004601|GO:0042744
Lal12g0796 323 Pfam Peroxidase 49 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal12g0796 323 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601
Lal12g0796 323 Gene3D Peroxidase, domain 2 160 297 - -
Lal12g0796 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Lal12g0796 323 ProSiteProfiles Plant heme peroxidase family profile. 20 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal12g0796 323 PANTHER PEROXIDASE 41 6 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0796 Lal-Chr12 6203014 6203985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0796 21 318 Peroxidase AT4G17690 57.718 1.14e-127 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0796 K00430 - gmx:100795676 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0796 12 6203014 6203985 Lal13g0903 13 6220390 6221358 LSH
Lal12g0796 12 6203014 6203985 Lal24g0716 24 5356796 5357764 LSH