Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0791 ATGTCTGATAATTCCCAAACTTCATTCTTCCCCGGATTCCGATTCCACCCTACCGACGAAGAACTCGTCCGGTTCTACCTTAAGCGCAAGCTCACCGGTAAACACTTCCGATTTGATCCCATCGCTGAAGTTGATGTCTACAAGAACGAACCGTGGGACCTTCCTCACATGTCGAAGCTGAAGACGAGGGATTTGGAATGGTACTTCTACAGTGCACTTGATAAGAGGTATGGGAATGGCTCTAGGACAAAGCGTATTACTGAGAAAGGTTACTGGAAAACAACGGGCAAGGATCGCCAGATCAAACACGGAAGCCGAGTCGTCGGAATGAAGAAGACTCTTGTTTACCATGCTGGCCGTGCGCCTCACGGTGATCGCACCAATTGGGTGATGCATGAGTATAAACTTGTTGATGAGCAATTGGCTCAAGCTGGAATTCTGCTGGATGCTCTTGTGCTGTGCAGAATTTTCGAGAAGAGCGGCGCTGGTCCGAAGAATGGAGAGAAGTATGGTGCTCCATTGATTGAGGAGGAATGGGAAGATGATGAGGTGGTTCCTGTACCCAGCGCTGGTGATAAGGTGTTACATGAACTACTTGCTGTTGACCCTTTTATTGAAACTAACGACTTTGAGAAGAAGGTTGATATGGTTGTGCCAATTGAAAATGCTGGTCCTCCATCAAACTTTTATCATGGGGAGTGTAGTAGCTATCCTGAGCATTCACAAGAACCCGTTACAGATCAGAAGCCATTGGAAGGCAATATTGGACTTTCTGAGCCTCAAAATGGCCAGCTTTCTAATACTGCTGAGCAATATACTGTGGAAGCCTCTTCTGTAAAAGATGGTAACAGTGGTGAACTGGGAAATATTGAGAATGCTTTCGACTTCAATTTTACTTTTGATGATCTAGGTATATACTTGGATGCCGCTGATTATCCTCTGATTGATGATACTGGATCATTCCTGGAAACCAAAGATCTTTCAAATCCATGTGGGGCTAATCCCACTGAGGCAGATCCTTCTGGCACTGTTATGATAGATGAATATCTTTCTTACTCGGATGATGATATATCCAAGTATTTATCTTTTGATTCTCCTCTGTCTGTGGAGAGTGAAAACACCATTCCTGACCAGAAACCACTTATTCAACAGAATGCGGAGGGAGTTAACAATGGTATTCCCATGTCTAGCAAACATGATTTGGAAGCACTTTCTAGCAATGAAGCTTCTTCAAAGCAGAATCCACAACCTCTATCAGGAAGTACACATCCTTTTGTGAAGCAGGCCAATAAATTGTTGGCTAGCATATCTGCTCCTCCTGCATTTGCTTCAGAGTTTCCACCTAAACACATTGCTCTTGGGCTCGCAGCTCAGCCTTCCAGTTCAGCTCATGTGACTGCAGGCATGATCAGTATCGCAGACATTACTTCAACAGGCAATGTGATGGATAAGAATGGACGGTTGAAGGCCATGATATCTACCGAGTTTTCTCAGTCTGATGTATACTCTCTTACATTGGTACCTGTTATGGGTTTGTTCTCTAGGAAGACTGCGTTTGTGCTGTCCCATGAATGGATTTTCTTCATGATGATGCTCTTTCCACTTCTGATTCTTTCACTGGTCTGCAAGTTCGGAAGTTTCACTTCTGCTGCCGGTAAATGA 1662 0.4434 MSDNSQTSFFPGFRFHPTDEELVRFYLKRKLTGKHFRFDPIAEVDVYKNEPWDLPHMSKLKTRDLEWYFYSALDKRYGNGSRTKRITEKGYWKTTGKDRQIKHGSRVVGMKKTLVYHAGRAPHGDRTNWVMHEYKLVDEQLAQAGILLDALVLCRIFEKSGAGPKNGEKYGAPLIEEEWEDDEVVPVPSAGDKVLHELLAVDPFIETNDFEKKVDMVVPIENAGPPSNFYHGECSSYPEHSQEPVTDQKPLEGNIGLSEPQNGQLSNTAEQYTVEASSVKDGNSGELGNIENAFDFNFTFDDLGIYLDAADYPLIDDTGSFLETKDLSNPCGANPTEADPSGTVMIDEYLSYSDDDISKYLSFDSPLSVESENTIPDQKPLIQQNAEGVNNGIPMSSKHDLEALSSNEASSKQNPQPLSGSTHPFVKQANKLLASISAPPAFASEFPPKHIALGLAAQPSSSAHVTAGMISIADITSTGNVMDKNGRLKAMISTEFSQSDVYSLTLVPVMGLFSRKTAFVLSHEWIFFMMMLFPLLILSLVCKFGSFTSAAGK 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0791 553 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 549 - -
Lal12g0791 553 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
Lal12g0791 553 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Lal12g0791 553 MobiDBLite consensus disorder prediction 403 423 - -
Lal12g0791 553 PANTHER NAC DOMAIN-CONTAINING PROTEIN 53-LIKE 4 549 - -
Lal12g0791 553 Pfam No apical meristem (NAM) protein 11 136 IPR003441 GO:0003677|GO:0006355
Lal12g0791 553 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0791 Lal-Chr12 6156705 6160452 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0791 1 538 NAC Transcription Factor Family AT5G04410 39.966 1.51e-119 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal12g0791 NAM 3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0791 - - lang:109338424 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0791 12 6156705 6160452 Lal12g0791 12 6156705 6160452 ECH
Lal12g0791 12 6156705 6160452 Lal24g0715 24 5349448 5353807 LSH