Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0785 ATGGGACTTGCAGTGCCTAATGCTGATGATTTGCTGAGTGATAAAGCATCACTGATGAGAGAATCTCTTCAAAGAAGCCAAATAATCACAGATAAAGTTGCTTCAATCCTTGGTTCCTTTGATCACCGTCTTTCTTCCCTTGAAACCGCTATGCGCCCAACTCAGGTTAGGACTAATTCTATTAGGAAAGCTCATGAGAATATTGATAAGACTTTGAAGGCTGCAGAGGGAATATTGGCTCGTTTTGATCAATTTCGTCAAGCGGAGGCAACAATACTTAAAGGGCCACACGATGGCATGGAAAACTATCTTCAAGCCATTGCGGAGCTGAGAAGCAACATTCAGTTTTTTGGCAATATCAAAGGTTTTAAGAGTAATGATGGTATTATCAACCATGGCAGTAGTTTGCTAGCTAAAGCTATTTCTAAGTTAGAAGATGGGTTTAGGCAGCTATTATTATCTTACAGCAAACCAGTCGAACCTGAGTGCCTCTTTGATTGCCTTCCAAACTCAATGCGGCCTTCAACAGGATCGCCTGCCCATGATGATGGTCCTAATGGCAAGAATCATTCTAATCACCATTCTGAGGCACACGATATTGCTGATGCTATTGTATATACACCACCAGCTCTTATTCCACCAAGTGTTTTGCCGCTGCTACATAATTTGGCTCAGCAAATGATTGATGCTGGTCATCAACATCACTTACTTAGTACATACAGAGATGCTCGTTCTAATGTATTAGTAGAAAGCCTACAAAAGCTTGGGGTTGAAAAAATCGATACAGACGATGTTCAAAAACTACAATGGGAAATTTTGGAAGCCAAAATTGGAAACTGGATTCATTTCATGCGCATAGCTGTCAAATTGTTGTTTGCTGGTGAAAGGAAAGTTTGTGATGAAATATTTGAAGGCTTTGATTCTCTCAGCGAACAGTGTTTTGCTGAGGCGACTACAAACAGTGTTTCTATGCTACTTAGTTTTGGAGAAGCAATTGCCAGAGGCAAGAGATCCCCAGAAAAGTTATTTGTGCTTTTGGACATGTACGAAATAATGCAAGAGCTCCATTCAGAGATCGGAACACTCTTTAAAGGCAAGGCTTGCGTGGAAATAAGAGTAGCTGCAGCGGGTTTGACAAAACAACTTGCACAAACAGCCCAGGAGACCTTTGGAGATTTTGAAGAAGCTGTTGAGAAGGATGCTACAAAGACTGCAATAACAGATGGAACTGTCCATCCTTTGACAAGCTATGTCATTAACTATGTGAAGTTTTTATTCGACTACCGGTCCACCTTGAAGCAACTTTTCCAAGAATTTGAAGATACGGAGGATTCTCCACAGCTAGCATCTGTAACAATGCGCATAATGCAAGCTTTGCAAACTAATTTAAATGGGAAATCAAAGCAATATAAAGACCTCGCATTGACACATCTTTTCCTCATGAACAATATTCATTATATTGTTAGATCAGTTCGGAGGTCTGAAGCGAAGGATTTGCTGGGGGACGATTGGGTACAAAGACATAGGAGGATTGTTCAGCAGCATGCAAATCAATACAAAAGAAACGCTTGGGCAAAGATTCTTCAGTGCCTATCTATCCAGGGCCTTGCCTCATCGGGTGGCGGGAGTGGTACTGCCGGTGATGGTGGACCTGGAAGTAGCAGTGGTGCTTCAAGAGCAGTTGTTAAAGATAGGTTTAAGACATTCAATGTTATGTTTGAGGAACTCCATCTGAGACAATCTCAATGGACAGTTCCTGACAGCGAATTGCGGGAATCGCTTAGGCTTGCAGTCGCCGAAGTCTTGCTGCCTGCCTATAGATCATTTGTGAAACGTTTCGGGTCTCTTGTAGAGAGTGGAAAGTCTCATCAGAAATACATCAAATACACACCGGAAGATCTAGATCGAATGTTGGGTGAATTTTTCGAAGGAAAATCATCGATCGAAACAAGGCGCTAG 1959 0.4186 MGLAVPNADDLLSDKASLMRESLQRSQIITDKVASILGSFDHRLSSLETAMRPTQVRTNSIRKAHENIDKTLKAAEGILARFDQFRQAEATILKGPHDGMENYLQAIAELRSNIQFFGNIKGFKSNDGIINHGSSLLAKAISKLEDGFRQLLLSYSKPVEPECLFDCLPNSMRPSTGSPAHDDGPNGKNHSNHHSEAHDIADAIVYTPPALIPPSVLPLLHNLAQQMIDAGHQHHLLSTYRDARSNVLVESLQKLGVEKIDTDDVQKLQWEILEAKIGNWIHFMRIAVKLLFAGERKVCDEIFEGFDSLSEQCFAEATTNSVSMLLSFGEAIARGKRSPEKLFVLLDMYEIMQELHSEIGTLFKGKACVEIRVAAAGLTKQLAQTAQETFGDFEEAVEKDATKTAITDGTVHPLTSYVINYVKFLFDYRSTLKQLFQEFEDTEDSPQLASVTMRIMQALQTNLNGKSKQYKDLALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWAKILQCLSIQGLASSGGGSGTAGDGGPGSSSGASRAVVKDRFKTFNVMFEELHLRQSQWTVPDSELRESLRLAVAEVLLPAYRSFVKRFGSLVESGKSHQKYIKYTPEDLDRMLGEFFEGKSSIETRR 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0785 652 MobiDBLite consensus disorder prediction 174 194 - -
Lal12g0785 652 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 36 648 - -
Lal12g0785 652 Pfam Exo70 exocyst complex subunit 279 639 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lal12g0785 652 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 648 IPR004140 GO:0000145|GO:0006887
Lal12g0785 652 Gene3D Exocyst complex component Exo70 77 652 - -
Lal12g0785 652 SUPERFAMILY Cullin repeat-like 78 643 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0785 Lal-Chr12 6103806 6112407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0785 3 652 EXO70 exocyst subunit family AT5G03540 70.162 0.0 921
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0785 K07195 - gmx:100813987 1033.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0785 12 6103806 6112407 Lal13g0891 13 6130893 6142123 LSH
Lal12g0785 12 6103806 6112407 Lal24g0704 24 5243398 5252627 LSH