Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0774 ATGGCAACAAGTACTGGATCAAAGTTTTTGGAGGGTGCAACTATAAGAGATTCTCATTCTCTCACTTCTTCTCATCAAGTTCATGTACTAACAAGTGAGGTAAACTTATCAAATTCTACTTCAATGAAAAAAGAGGTACCTTTTGCCACTTTCATTACTCATATCCCTACAAAGTTTCATGAAGACATCAATAACATGCAAGAGAAAAATCAACCCATTTTTGGTTTCAATTCTATATTCAACCCTTCTGTCACACCCTCAGATACCACAACACATAGCTCCATTCCTTTTAATCTTTTGCAAACTCTCCCAGCATTAACCAAAGCACCAAATTCTAATGAGAAAGTTGCTTCTTCTTCCACATCAAAGTTTCCAAATTTGACTTTGTTTTTGCATGAACCTTCCAAGGTGTACTCAAAATCCTCACATATCAAAAGTGGCAAAGTCATGTCAGAAGCATCTTCAGACCCTACATTTCATGCACCCAACATTTTCCAAACACATCATCATCAACCAGTTAGTGATAATGATTCACTCAAAATGAACAAGAACAATGTAACAAATATGAGGCCCAAATCATTCAATGAAAAATGGTTAAGCACCACTAGGGCTCAACCTATGAAGTTATGTGGTGATGGAAGAGAGAAGCTGTTTAAAGGGGTGAGGCAAAGACAATGGGGGAAATGGGTAGCAGAGATTAGATTACCAAGAAACAGAAAAAGGGTTTGGTTAGGAACATTTGACACAGATAAAGAAGCTGCATTTGCATATGATACAGCAGCATATATTCTAAGAGGAGAATTTGCTCAGCTAAATTTCCCACATATGAAGCATATGATTCAAGCCAATTCTTTGAATGGAACTATTGCTGCACTTGTTGAGGCAAAACTTCGAGCAATATCATCATCATCACAAGGTGGTTCTTCTTCTTCTTCTTCTTCTTATAGGAAGAAGATTACTGATTCATCATTAACAAGTGATGATAATGGCATATTGAAAAGTAGAAAAGGCAAGGAATCAATTTCAAGCTTAAAGGAGTGGCAGTTTAGTTGTGAGACAAGTGAGAGAAGCAGAAGTGTGCATCATGAGGTATCAGATTTGGAAGCTGTTCAGTTAAGCAGAATGCCATCCTTGGATATGGATATCATTTGGGATGCACTTTTAGTCTCCGATTCTTACAACAATAACTAA 1191 0.3703 MATSTGSKFLEGATIRDSHSLTSSHQVHVLTSEVNLSNSTSMKKEVPFATFITHIPTKFHEDINNMQEKNQPIFGFNSIFNPSVTPSDTTTHSSIPFNLLQTLPALTKAPNSNEKVASSSTSKFPNLTLFLHEPSKVYSKSSHIKSGKVMSEASSDPTFHAPNIFQTHHHQPVSDNDSLKMNKNNVTNMRPKSFNEKWLSTTRAQPMKLCGDGREKLFKGVRQRQWGKWVAEIRLPRNRKRVWLGTFDTDKEAAFAYDTAAYILRGEFAQLNFPHMKHMIQANSLNGTIAALVEAKLRAISSSSQGGSSSSSSSYRKKITDSSLTSDDNGILKSRKGKESISSLKEWQFSCETSERSRSVHHEVSDLEAVQLSRMPSLDMDIIWDALLVSDSYNNN 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0774 396 PRINTS Ethylene responsive element binding protein signature 218 229 IPR001471 GO:0003700|GO:0006355
Lal12g0774 396 PRINTS Ethylene responsive element binding protein signature 240 256 IPR001471 GO:0003700|GO:0006355
Lal12g0774 396 MobiDBLite consensus disorder prediction 302 337 - -
Lal12g0774 396 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF062 5 391 - -
Lal12g0774 396 SUPERFAMILY DNA-binding domain 217 275 IPR016177 GO:0003677
Lal12g0774 396 MobiDBLite consensus disorder prediction 302 330 - -
Lal12g0774 396 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 5 391 - -
Lal12g0774 396 Pfam AP2 domain 218 266 IPR001471 GO:0003700|GO:0006355
Lal12g0774 396 Gene3D AP2/ERF domain 217 276 IPR036955 GO:0003700|GO:0006355
Lal12g0774 396 ProSiteProfiles AP2/ERF domain profile. 217 274 IPR001471 GO:0003700|GO:0006355
Lal12g0774 396 CDD AP2 216 275 IPR001471 GO:0003700|GO:0006355
Lal12g0774 396 SMART rav1_2 217 280 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0774 Lal-Chr12 6005636 6006826 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0774 83 387 AP2-EREBP Transcription Factor Family AT4G13620 41.987 7.56e-60 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Lal12g0774 AP2 1.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0774 - - lang:109341783 535.413