Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0772 ATGGCAGAGCTGAACTTACATGGATTTTGGTATAGTCCTTTTACTTTAAGGGTTGTATGGACCCTAAAGTTAAAGGGTATACCATATAACAACATAGAGGAAGATCGATACAACAAGAGTCTTCAACTTCTTGAATACAATCCCGTGTATAAGAAAACTCCGGTATTAGTTCATGGTGGAAAACCAATAAGTGAGTCAACAATCATTGTTGAATATATTGATGAGATTTGGCCTCATAACTCATTGGTTCCTTCTCATCCTTATGATAGAGCTCAATCTCGTTTTTGGGTCAAATATGCTGATGAAACGTTTCCTGCCGTTGTTGCACTCTTCCGTAGCAATGGTGATGAAGAGAAAGAGAAGGCTATAGTCGATATCAGAGAACATTTTAGAGTTGTTGAGGAACACTGCTTTGATGATGAGAATAAAATTTTGGGGAGAGACACTATTAACATTGTTGACTTAGCATTTGGGTCAATTATCAACTTTATTGTAATTTTGGATGATATCATTCAAGTGAAAGTTTTGGAAGCAGAGAAATTCCCAAGCTTGGATTCATGGTTTAATAATTTCAAGAATATCCCAATCATCAAAGAAAACCTCCCTAACCATGAGAAAATGATAGATACCATCAATTCTATTAGACAAAAATTACTTATATCTTAA 666 0.3498 MAELNLHGFWYSPFTLRVVWTLKLKGIPYNNIEEDRYNKSLQLLEYNPVYKKTPVLVHGGKPISESTIIVEYIDEIWPHNSLVPSHPYDRAQSRFWVKYADETFPAVVALFRSNGDEEKEKAIVDIREHFRVVEEHCFDDENKILGRDTINIVDLAFGSIINFIVILDDIIQVKVLEAEKFPSLDSWFNNFKNIPIIKENLPNHEKMIDTINSIRQKLLIS 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0772 221 CDD GST_N_Tau 4 77 - -
Lal12g0772 221 SUPERFAMILY GST C-terminal domain-like 75 218 IPR036282 -
Lal12g0772 221 SUPERFAMILY Thioredoxin-like 4 104 IPR036249 -
Lal12g0772 221 Gene3D - 86 221 - -
Lal12g0772 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Lal12g0772 221 SFLD Main.3: Omega- and Tau-like 1 219 IPR045073 -
Lal12g0772 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 210 IPR010987 -
Lal12g0772 221 SFLD Glutathione Transferase (cytosolic) 1 219 IPR040079 -
Lal12g0772 221 Pfam Glutathione S-transferase, N-terminal domain 3 75 IPR004045 -
Lal12g0772 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 215 IPR045073 -
Lal12g0772 221 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 215 - -
Lal12g0772 221 CDD GST_C_Tau 87 209 IPR045074 GO:0004364|GO:0006749
Lal12g0772 221 Gene3D Glutaredoxin 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0772 Lal-Chr12 5988684 5990240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0772 3 218 Glutathione S-transferase Gene Family AT2G29460 39.171 1.31e-51 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0772 K00799 - gmx:547584 317.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0772 12 5988684 5990240 Lal12g0772 12 5988684 5990240 ECH
Lal12g0772 12 5988684 5990240 Lal24g0689 24 5122750 5127439 LSH