Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0745 ATGAACTTGAATCATGAAATACCAGAGGCTGTAGATGAAATTGATGTTAGTGAAGATGAAAATATTAATGAAGTAGAGGAGTTTGATTTTGAAGAAATTGACTTTGGATCATTAAACGAAGATGAAATGTATGGTATGAAGAAAGGATTTGGCATTAGAAAATATCATACCCGTCGGGACAAGGATGGTGAAATTTTATGGCAATCATTTTTTTGTGATAGAGAGGGATTTAGGGATAAGAAAAATGAATTAGTTCGAAAAAGGGCTCCAAGAAAAGAAACGAGATGTGGTTGTTTAGCAAGAATGAAAATTCACATTGACAAGGAGAAAGGTGATTGGTATGTCAGTTTTTTTGTTGATGATCATAATCATGAATTGGTTGGCGAACATTACGGTGGGATGATAGCGTCAAACCGAAGTATGACAGAAACAGACATCGCTTTGATGAACACAATGAGAGAAGTCGGAATTGGAACAGGCAAAAATTTTGGTTCATTCGCCGGTCAATCTGGTGGATATCGGTATATTGGATTCTCTAAGAAAGATATGTATAATCAAATTCAGAGACAAAGAATAATAGGAAATGGTGACGCAGAATCAGCATTACAATACTTGAAGGAACAATCAAAATCAGATTCTGCAATGTACTGGAGACATAGTGTAGATGAAGAAGGTAAGTTGCAACAATTATTTTGGGCGGATGGATGCAGCATTTTTGACTACTCAATTTTTGGAGATGTTCTAGCTTTTGATGCAACCTATGGTCGAAACAAGTACAAGTTTCCGGTGGTCATTTTTTCTGGTGTGAACCATCACAAGCAAACAACAGTATTTGCTGCTGGTATTGTGTCCAACGAGACAGAGGAAACGTATGTTTGGCTTTTGGGAAATTTCTTGGAGGCAATGAATGGGAAACATCCAAAGTGTGTTATCACTGATGGTGACTTGTCGATGAAAAATGCAATCAAAAGAATTTTCCCTGCAACTCATCATAGACTATGTGCTTGGCATATATGTAACAATGCTGGGAAAAATATAAAGAAGAATAACTTTCATAAGGACTTCCAGAAAGTTATGTATGTTGATGTTGAGATTGATGAATTTAATATGATGTGGGAGGAACTTATTGCTAAGCATGCACTTCATAATAATGCTTGGGCATCTCAGATATTTGATTGCAGAAGTATGTGGGCTAGGTCATACATTCGAGGAAAGTTTTATGCTGGTTTGCATACAACATCACGTTGCGAGGGATTACATTCACAAATGGGGAGATATGTAGAATCTGGGTATAATGTTACTGAATTTTTACATCACTTTCAACGATGTCTAAGTTACATGAGGAACAATGAGGTGATGGAAGATTTTAAATCTTCGTATGGTGATGAATTGTTACAAACTCCTTATCATAGTTTAGAGGGTCATGCTGCTTCCATATATACTAGAGTTGTTTTCAAAAAATTCCGTGAAATTTTATTGGAAGCTGCAAAATTAAGGATAATTTCTTCCCAACAAACCTCAAGTCATGTCATATACAAGATTGGGAAGCATTATAATCCGAACAAGAAATGGCATGTATCACATTATGATAATGGTAGTAATGTAGACATCAAATGCTCGTGTAAACGAATGGAATCTTTTGGGATGCCATGCAGTCATAGTGTTTTTGTATTACTAATTTTGGACATATCACAATTGCCATCTTGTTTGGTTCTGGAAAGGTGGACAAAGAAAGCAAAAAATGTTGAAGGTGTTAATTTTCAACAATGCGAGTTAAGCAGAGAATCGGTTAAAAGCAGTAGATACGGAGCTTTGAGTGATGCTTGTAGGGTGTTATGTAACCTTGCTTGCGAAACGGAGGAAGACTTTTCAGAGATGCTGGAAAAAGTTTATAACGAATGTGGTAGACTCCGATCAAAACAACACTCTAGTTCGATGGAAAATGTTGACAATGCCAATGTAGATCAAGTAAGAGACCCAGTTCGAGTGCGTGCTAAAGGGAGAGTACCGGGGATTACCTCAAGGTCCAAGCGAGGTAATCAATGTGGTATATGTCGAGAAATTGGGCACAATAGGGCAAGTTGTCCAAATATTGTTGGTAGTTGTAGTCGTACTTTTGATAATGATTTCAATGAAGAATGA 2142 0.3679 MNLNHEIPEAVDEIDVSEDENINEVEEFDFEEIDFGSLNEDEMYGMKKGFGIRKYHTRRDKDGEILWQSFFCDREGFRDKKNELVRKRAPRKETRCGCLARMKIHIDKEKGDWYVSFFVDDHNHELVGEHYGGMIASNRSMTETDIALMNTMREVGIGTGKNFGSFAGQSGGYRYIGFSKKDMYNQIQRQRIIGNGDAESALQYLKEQSKSDSAMYWRHSVDEEGKLQQLFWADGCSIFDYSIFGDVLAFDATYGRNKYKFPVVIFSGVNHHKQTTVFAAGIVSNETEETYVWLLGNFLEAMNGKHPKCVITDGDLSMKNAIKRIFPATHHRLCAWHICNNAGKNIKKNNFHKDFQKVMYVDVEIDEFNMMWEELIAKHALHNNAWASQIFDCRSMWARSYIRGKFYAGLHTTSRCEGLHSQMGRYVESGYNVTEFLHHFQRCLSYMRNNEVMEDFKSSYGDELLQTPYHSLEGHAASIYTRVVFKKFREILLEAAKLRIISSQQTSSHVIYKIGKHYNPNKKWHVSHYDNGSNVDIKCSCKRMESFGMPCSHSVFVLLILDISQLPSCLVLERWTKKAKNVEGVNFQQCELSRESVKSSRYGALSDACRVLCNLACETEEDFSEMLEKVYNECGRLRSKQHSSSMENVDNANVDQVRDPVRVRAKGRVPGITSRSKRGNQCGICREIGHNRASCPNIVGSCSRTFDNDFNEE 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0745 713 Pfam MULE transposase domain 247 341 IPR018289 -
Lal12g0745 713 Pfam FAR1 DNA-binding domain 43 127 IPR004330 -
Lal12g0745 713 PANTHER OS02G0262500 PROTEIN 29 665 - -
Lal12g0745 713 ProSiteProfiles Zinc finger SWIM-type profile. 524 562 IPR007527 GO:0008270
Lal12g0745 713 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 29 665 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0745 Lal-Chr12 5650919 5653191 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lal12g0745 MULE 1.3e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0745 - - lang:109350553 645.58