Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0738 ATGAACTCAGTGATGGAAGGTAGCTTATCAGAGACATCTACTGAAGAAACTGATCATCAGAAAGAAGACCTAGATGACTCCACATGTTCCAAACGTTCATATGATTGCACATTCTGCAAGAGAGGCTTCACCAATGCTCAAGCTTTAGGAGGTCACATGAATATTCATAGGAAAGAGAAAGCCAAGGCCAAACAAGGCATTTCATCAACCAAGAATTTATCTATGGCCCCTTCTTTTATTCCTCAAACCTCAACTTTTTATACCATGTTTCAATCTCAAGGAAACTATGACATCCATTTTCAACCATCAACTACACCTAATAATTATCCCAGAAACCCACCTGCATATGCCTTTCAATATGAGTTTATAAATCCAACATTAAGGTATGAATCTTTGAGTACAAATTATCAAGAGTTTTTGGGTTCCAACTTGAGTCTCCAAATTGGTACAACTCATGTGAGTAGTGATGAGGTTGTAAAAGGGATTCAGAATGATGAAGTTGTGGACTTAGAACTCAGGCTTACCCATTATCCATACTCAAACTAG 546 0.3773 MNSVMEGSLSETSTEETDHQKEDLDDSTCSKRSYDCTFCKRGFTNAQALGGHMNIHRKEKAKAKQGISSTKNLSMAPSFIPQTSTFYTMFQSQGNYDIHFQPSTTPNNYPRNPPAYAFQYEFINPTLRYESLSTNYQEFLGSNLSLQIGTTHVSSDEVVKGIQNDEVVDLELRLTHYPYSN 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0738 181 MobiDBLite consensus disorder prediction 12 27 - -
Lal12g0738 181 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 11 178 - -
Lal12g0738 181 ProSitePatterns Zinc finger C2H2 type domain signature. 36 56 IPR013087 -
Lal12g0738 181 Gene3D Classic Zinc Finger 10 85 - -
Lal12g0738 181 MobiDBLite consensus disorder prediction 1 27 - -
Lal12g0738 181 SUPERFAMILY beta-beta-alpha zinc fingers 31 61 IPR036236 -
Lal12g0738 181 ProSiteProfiles Zinc finger C2H2 type domain profile. 34 61 IPR013087 -
Lal12g0738 181 PANTHER OS07G0101800 PROTEIN 11 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0738 Lal-Chr12 5601994 5602539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0738 24 67 C2H2 Transcription Factor Family AT3G09290 63.636 9.65e-16 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal12g0738 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0738 12 5601994 5602539 Lal12g0738 12 5601994 5602539 ECH