Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0721 ATGCCTTTCAAAAGGTTCATTGAGATCGGAAGAGTTGCTCTCATCAACTACGGCAAAGAATATGGCAGACTCGTCGTCATCGTCGATGTCATTGATCAAAACAGAGCTCTTGTTGATGCACCTGATATTGTGAGGTCACAAATCAACTTTAAGAGGCTTTCACTTACTGATATCAAGATTGACATTAAGAGGGTTCCTAAGAAGAAGGACCTTATTAAAGCAATGGAAGCTGCTGATGTTAAAAACAAGTGGGAGAAGAGCTCATGGGGAAGGAAACTCATTGTTAAGAAGACTAGGGCTGCTCTTAATGACTTTGATAGGTTTAAGATCATGTTGACAAAGATAAAGAGAGCTGCAGTGGTTAGGCAAGAGCTTGCTAAGCTGAAGAAGACTGCAGCTTAG 402 0.4104 MPFKRFIEIGRVALINYGKEYGRLVVIVDVIDQNRALVDAPDIVRSQINFKRLSLTDIKIDIKRVPKKKDLIKAMEAADVKNKWEKSSWGRKLIVKKTRAALNDFDRFKIMLTKIKRAAVVRQELAKLKKTAA 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0721 133 PANTHER 60S RIBOSOMAL PROTEIN L14 1 133 IPR039660 GO:0003723|GO:0003735
Lal12g0721 133 Gene3D - 1 84 IPR014722 -
Lal12g0721 133 Coils Coil 118 133 - -
Lal12g0721 133 Pfam Ribosomal protein L14 45 117 IPR002784 GO:0003735|GO:0005840|GO:0006412
Lal12g0721 133 Gene3D - 92 127 - -
Lal12g0721 133 SUPERFAMILY Translation proteins SH3-like domain 5 93 IPR008991 -
Lal12g0721 133 PANTHER RIBOSOMAL PROTEIN L14, PUTATIVE-RELATED 1 133 - -
Lal12g0721 133 CDD KOW_RPL14 7 79 IPR041985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0721 Lal-Chr12 5463994 5465021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0721 1 133 Cytoplasmic Ribosomal Protein Gene Family AT2G20450 81.203 2.05e-74 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0721 K02875 - gmx:100499889 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0721 12 5463994 5465021 Lal12g0721 12 5463994 5465021 ECH
Lal12g0721 12 5463994 5465021 Lal24g0640 24 4727255 4727774 LSH