Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0715 ATGTCTGATCTTTCTTCAACCAAAGATCACAGTTACCCCACCTTGAATGTTGAGGCACAGGTTCCAAAACCTACCTCTCTCAAAAAGATTGTCACCGTTGCTTCCATTGCCGCCGGTATCCAATTCGGTTGGGCACTACAACTATCTCTCTTGACCCCTTATGTTCAGCTTTTGGGTGTCCCACACGCTTGGTCCTCCGTTATTTGGCTTTGTGGCCCTATCTCCGGTTTGCTTGTGCAACCCACCGTCGGTTACTACAGCGATCGGTGCAAATCTCGCTTCGGTCGCCGCCGTCCTTTTATCTTAGCTGGTGCAATTGGTGTCGCTGTTGCTATCATATTTATTGGATTTGCTGCAGATTTTGGCTATGGCTTGGGTGATGACCTCGCTAAAAAGACTCGTCCACGTGCTGTTGGTTTCTTTGTTGCTGGGTTTTGGATCCTTGACATGGCTAATAACATGTTGCAGGGACCTTGTCGGGCCTTCCTCGGAGACCTCTCCGCGGGGGACCAGAGCAAGATCCGTACAGCAAATTCTATATTCTCTTTCTTCATGGCTGTTGGGAGTATCCTTGGATATGCTGCTGGATCCTACAGCCGCCTTTACAAGATATTCCCTTTCACGGAAACCAAAGCATGCAATGTTTATTGTGCAAATCTTAAAAGTTGTTTCTTCATTGCTATTACACTATTGCTTGTCCTCGTCATCATCGCATGTGTGTACGTCAAGGAAATACCCTTGACATCATTAGTATCTGTCAATGATGACGATGATGAGTCAAGTACCTCATGTTTGGGGTTAGTCTTTGGTGCTTTCAAGGAAATGAAGCGCCCCATGTGGTTGTTGCTCATAGTGACATTTATGAATTGGATAGCGTGGTTTCCATGGTTGCTTTATGATACTGATTGGATGGGTCGTGAGGTGTATGGTGGTGATGCTGGAGACAAATTGTTTGATATGGGTGTTCATGAAGGTTCATTAGGTCTTATGTTAAACTCCATTGTTCTTGGTGTGATGTCTTTGGCTATTGAGCCATTATCTCGTGTTCTCGGAGGAGTGAAGAGACTTTGGGGTTTGGTTAATTTTATTCTTGCCATTTGTTTGGCAATGACTGTGCTCATTTCTAAGGAGGCCAATGCCCACCGCATTTTTGCAATGGCCATCGGCGCTAAGAAGGATGCTCCACCACCCGCTAGTGTTCGCGGTGGCGCCTTAGCAATGTTTTCAATTCTCGGCATTCCTCTTGCGATTACTTTCAGTGTGCCATTCGCTCTAGCATCCATATTCTCCAGCACCTCCGGAGCAGGCCAAGGTTTATCTTTGGGAACTCTCAATCTTGCAATTGTTATTCCACAGATGATAGTGTCAACAATAAGTGGACCACTAGATGGTGCATTTAGTAAAGGTGGCAAAGGTAACTTGCCGGCGTTCGTGATGGGTGCCATAGCCGCCGCCGTGAGTGGTGTAATGGCGATTGTTTTGCTTCCAACTCCTCCGCCACAAAGCTTGGCCAAGGCAGCAATTGGTGGAGCTTTTATATGGGAAGTGGTAGTAGCAAAAACAAAGTTTTGGAGATGA 1578 0.4632 MSDLSSTKDHSYPTLNVEAQVPKPTSLKKIVTVASIAAGIQFGWALQLSLLTPYVQLLGVPHAWSSVIWLCGPISGLLVQPTVGYYSDRCKSRFGRRRPFILAGAIGVAVAIIFIGFAADFGYGLGDDLAKKTRPRAVGFFVAGFWILDMANNMLQGPCRAFLGDLSAGDQSKIRTANSIFSFFMAVGSILGYAAGSYSRLYKIFPFTETKACNVYCANLKSCFFIAITLLLVLVIIACVYVKEIPLTSLVSVNDDDDESSTSCLGLVFGAFKEMKRPMWLLLIVTFMNWIAWFPWLLYDTDWMGREVYGGDAGDKLFDMGVHEGSLGLMLNSIVLGVMSLAIEPLSRVLGGVKRLWGLVNFILAICLAMTVLISKEANAHRIFAMAIGAKKDAPPPASVRGGALAMFSILGIPLAITFSVPFALASIFSSTSGAGQGLSLGTLNLAIVIPQMIVSTISGPLDGAFSKGGKGNLPAFVMGAIAAAVSGVMAIVLLPTPPPQSLAKAAIGGAFIWEVVVAKTKFWR 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0715 525 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 19 505 - -
Lal12g0715 525 CDD MFS_SLC45_SUC 30 492 - -
Lal12g0715 525 SUPERFAMILY MFS general substrate transporter 31 503 IPR036259 -
Lal12g0715 525 Pfam MFS/sugar transport protein 41 291 - -
Lal12g0715 525 Gene3D MFS general substrate transporter like domains 23 497 IPR036259 -
Lal12g0715 525 TIGRFAM GPH_sucrose: sucrose/H+ symporter 26 499 IPR005989 GO:0005887|GO:0008515|GO:0015770
Lal12g0715 525 PANTHER SUGAR TRANSPORTER 19 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0715 Lal-Chr12 5422908 5425832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0715 20 509 Sucrose Transporter Gene Family AT1G22710 64.056 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0715 K15378 - gmx:547679 661.759