Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0707 ATGGAACGGGATGGAAGCGTTGTACCTGCAGACTCGCTGGCCATGGTGGTTGTGAAGAAGAAAACACAATCTCCCAGAAGTTGGATTCTGTTTGATGCAACAGGACAAGGTTCAATGCTTGATGTTGATAAATATGCCATCATGCATAGGGTTCAGATTCATGCTCGTGATCTTAGAATCCTTGACCCCTTGCTCTCTTACCCCTCCACTATTCTGGGTCGTGAGAAGGCCATTGTTCTTAACTTGGAGCATATCAAGGCAATCATCACGGCTGAAGAGGTGTTGCTGCGAGATCCAACAGATGAAAATGTGGTCCCTGTAGTTGAGGAATTGCAAAGGCGATTGCCTCAAGTAAGTTTCTCTCATCAACAGCAAGGAGATGGTAAAGAGTATCGTGGTGGTCAGCACGATATTGAAGCAACCGAAGAAGATGAGTCACCATTCGAGTTCCGGGCCCTGGAGGTAGCTCTAGAAGCTATTTGTAGTTTCCTTGCTGCACGTACAACAGAGTTAGAGATGGCTGCTTATCCTGCATTAGATGAACTTACCTCCAAGATTAGTAGTCGTAATTTGGACAGAGTTCGTAAACTGAAGAGTGCAATGACTAGGCTGACAGCTAGGGTTCAAAAGGTGAGAGATGAGCTTGAACAATTACTGGATGATGATGATGATATGGCTGACTTGTACTTGTCAAGAAAGGCGGGTTCATCATCACCAGTTAGTGGATCAGGCCCTGCAAATTCATTTGGTGCTTCCTCCACCATAGGATCAAAGATATCTAGAGCAAGTAGAGCGAGTATGGCGACAGTTCGTTTTGATGAAAATGATGTGGAAGAGCTTGAAATGTTACTCGAGGCTTATTTCATGCAAATTGATGGCACATTGAACAAATTAACCACACTGCGAGAGTATATTGATGATACTGAGGATTATATTAATATCCAACTTGATAACCATCGAAATCAGCTTATTCAGTTAGAGCTCTTCCTTAGCTCCGGAACTGTTTGTCTATCTTTCTATTCTCTGGTAGCCGCAATATTTGGAATGAATATTCCATACACTTGGAATGACAATCATGGTTACATGTTCAAATGGGTGGTTATCGTCTCCGGAGTATTTTCTGCTGTTGTGTTTCTCCTGATTACTGCTTATGCTCGCAAAAAGGGGTTGATTGGATCATGA 1182 0.4306 MERDGSVVPADSLAMVVVKKKTQSPRSWILFDATGQGSMLDVDKYAIMHRVQIHARDLRILDPLLSYPSTILGREKAIVLNLEHIKAIITAEEVLLRDPTDENVVPVVEELQRRLPQVSFSHQQQGDGKEYRGGQHDIEATEEDESPFEFRALEVALEAICSFLAARTTELEMAAYPALDELTSKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKAGSSSPVSGSGPANSFGASSTIGSKISRASRASMATVRFDENDVEELEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCLSFYSLVAAIFGMNIPYTWNDNHGYMFKWVVIVSGVFSAVVFLLITAYARKKGLIGS 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0707 393 PANTHER MAGNESIUM TRANSPORTER MRS2-I 1 393 - -
Lal12g0707 393 CDD Mrs2_Mfm1p-like 28 390 IPR039204 -
Lal12g0707 393 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 329 380 IPR045863 -
Lal12g0707 393 Pfam CorA-like Mg2+ transporter protein 273 381 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lal12g0707 393 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 393 IPR039204 -
Lal12g0707 393 Gene3D - 12 99 - -
Lal12g0707 393 Coils Coil 194 221 - -
Lal12g0707 393 Gene3D Magnesium transport protein CorA, transmembrane region 107 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0707 Lal-Chr12 5327323 5332803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0707 1 366 MRS2 Gene Family AT5G64560 81.793 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0707 K16075 - gmx:100810239 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0707 12 5327323 5332803 Lal12g0707 12 5327323 5332803 ECH
Lal12g0707 12 5327323 5332803 Lal13g0809 13 5442148 5447667 LSH