Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0695 ATGATTCCATTACAACAAACCTCTACTCTAGTAACACCACCACACAAAAACATTTTCCTTACACCTTCAGATAATTCATACACCAATTGGTCCCAGAGAAATATTGCCAATTCCTACTACCCAATAGGATTCTCATCACCAAATAATAACAAAATTGATGTCTCACATGAATACCTTTACAATTGTAAGGGATTCTTGGATTTTCCACAAGAAATTCCTACTCAATATGATGCAATTTTACAACCTCATGTCTATGCATCAATGGTAGTAAATCCTAGACTTCAAGATGATATTTCACACATTACTGTAGCTGGGAATGGTAATGAGGATACTAATCATAAAATTGTTACCAACACAATCAAAAGCCAGTGGACTCCTGAAGAGGATAAAGTTCTGGTGGAATCAGTGAGACGTTTTGGGCTTAAAAAATGGTCTCACATAGCAAAGTTACTGAATGGCAGGAAAGACTCATGGTCTGAAGAGGAGGATTTGATTCTTATTGAAGCTCACAAGGTTGTTGGAAACAAATGGGCAAAAATTGCAAAGAGATTAGTTGGAAGGACTGAGAACACTGTCAAGAACCATTGGAATGCAACTAAGAGGAGTTTGAACACAAAGAGGAGAGTCAACAAGTGCATCAATCCAAATGGAGAACTACTTTTGAACTACATTAAGCAAATTACTAATAAAGCAGTAGCCAAAAAAGAAGTGAAGAAATCCATGAGTGAGAATCACAATGATATCAACTTCCACCAAGTTGTGTATAAGAACTCAGAGAATGTGTATGATAATGGTGGAGTTGATTGGTTATTGCATTCTTATGCTCCCAGCACCATAAGTGGAAATGGTAGCTATGTTCCAATGATGGTCAATGATGGTGAAATTGCAAGTGGGTCAGGTATGAAAGATATATAG 915 0.3683 MIPLQQTSTLVTPPHKNIFLTPSDNSYTNWSQRNIANSYYPIGFSSPNNNKIDVSHEYLYNCKGFLDFPQEIPTQYDAILQPHVYASMVVNPRLQDDISHITVAGNGNEDTNHKIVTNTIKSQWTPEEDKVLVESVRRFGLKKWSHIAKLLNGRKDSWSEEEDLILIEAHKVVGNKWAKIAKRLVGRTENTVKNHWNATKRSLNTKRRVNKCINPNGELLLNYIKQITNKAVAKKEVKKSMSENHNDINFHQVVYKNSENVYDNGGVDWLLHSYAPSTISGNGSYVPMMVNDGEIASGSGMKDI 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0695 304 PANTHER MYB DOMAIN PROTEIN 100-RELATED 109 246 - -
Lal12g0695 304 CDD SANT 124 157 IPR001005 -
Lal12g0695 304 ProSiteProfiles Myb-like domain profile. 154 200 IPR001005 -
Lal12g0695 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 154 204 IPR017930 -
Lal12g0695 304 Pfam Myb-like DNA-binding domain 155 197 IPR001005 -
Lal12g0695 304 SUPERFAMILY Homeodomain-like 119 196 IPR009057 -
Lal12g0695 304 ProSiteProfiles Myb-like domain profile. 116 151 IPR001005 -
Lal12g0695 304 PANTHER MYB PROTEIN-RELATED 109 246 - -
Lal12g0695 304 SMART sant 120 152 IPR001005 -
Lal12g0695 304 SMART sant 154 202 IPR001005 -
Lal12g0695 304 Gene3D - 158 199 - -
Lal12g0695 304 Gene3D - 115 157 - -
Lal12g0695 304 CDD SANT 157 200 IPR001005 -
Lal12g0695 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 121 153 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0695 Lal-Chr12 5191183 5193277 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0695 120 237 MYB Transcription Factor Family AT4G18770 49.265 3.98e-36 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal12g0695 Myb_DNA-binding 7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0695 K09422 - lang:109346178 488.804