Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0689 ATGGCAACCAGGCGTTTGAGGGCATTCAAGAGATGGATGAAGTCTAAAGGATTTGAATGGAGTGATGCATTGGATTTTGTTGATACCCCAAAAGAGGGTATAGCTGTGAGGGCATTGTGCCAATTGAAGGAAGGTGATGTTGTGGCCAAAATGCCAAAGGAAGCTTGTCTTACAATAAAGAATAGCGGGGCTTGTGGCATCATTGAAGATGCTGGTTTTGAAGGTCATTTGGCTTTAGCATTTGTTATCATGTATGAGAGAAGTTTGGGTTGTGATTCCCCTTGGGCTGGGTACCTTCAGCTATTGAATCAACAAGAGTGTTTGCCATTGGTTTGGACCCTCGATGAAGTCAATGAGCTTCTATGTGGTACTGAGCTTCACCAGGAAGTGCAAGAAGACAAGGCTCTTATGTATGAGGACTGGAAAGAGAGTATCCTGCCCCTATTGGATTTAGCACCTTCAAAGCTTAACCCGGTTTTTTTTGGTATAGAACAATACTTTGCTGCAAGAAGTCTTATTTCTTCGCGATCTTTCGAGATAGATGATTACCATGGTTCTGGCATGGTCCCGTTGGCAGATTTGTTCAATCATAAAACTGGTGCTGAGGATGTGCATTTCACTGCTACACCCTCTAACTATGAATCTGACAATGATATTGATGGTAATAACAGTGATGAGAGCGTCACTGATGAAGAAGCATTGGCTCAAAATTCCTCTATAGATGCGACTGATTTTGACACTGCTCACGTTAGTGACTCCGAGTGTTCTTCAGATATAGGAGCTGATCCTTCAATGCTGGAGATGATTATGATAAAAGATGTCAGCAGTGGAACCGAGGTTTTCAATACTTATGGGCTATTGGGTAATGCTGCTTTGCTTCATAGATATGGATTCACCGAGCAAGATAATCTATATGATATTGTGAACATTGATTTGGATCTGGTACTTAAATGGTGTTCTTCGTTGTTTTCTGGCCGCCACGGAAGAGCAAGAGTCTCGCTTTGGAGAAGGTTAGGCTATTCTGCATGTGGCATAAAAAACTCCGAATATTTTGAGATCTCATTTGATGGAGAACCACAAGTTGAACTCCCCATCCTATTATACATCATGTTATTGCCGGATAAGGCCTACCATGAGTTAGACCTATCGGTATCAACTGCAGGGAAGCGTGATGAATCGAGTAAAACCACTCTCTTGTATGATAAAATATATCCGAATAAATCATCTAACATGAGCAAGAAGTTTTTGCTGACTAATCAAGTATGTGATGCTCTGATATCCCTTGCTGATATGAGGGAGAGTCTGTATGGTTCAGAATCAATAGAAGATGATATTGAGGCATTGGAGAGGTGTAGTTTGGTTAGTGAGAAAAAGGTATATCATTCTTCGGTACTGCGAATCAGCGAAAGGAAGATCCTTCAAAAGCTCAGAAACTATGCTTCAAAACCACTCAACAAAATGACTAATCATAGTCCTAGAAGGAAGTTGAGAAGGACAACAAAGAAAAGTTGA 1512 0.4107 MATRRLRAFKRWMKSKGFEWSDALDFVDTPKEGIAVRALCQLKEGDVVAKMPKEACLTIKNSGACGIIEDAGFEGHLALAFVIMYERSLGCDSPWAGYLQLLNQQECLPLVWTLDEVNELLCGTELHQEVQEDKALMYEDWKESILPLLDLAPSKLNPVFFGIEQYFAARSLISSRSFEIDDYHGSGMVPLADLFNHKTGAEDVHFTATPSNYESDNDIDGNNSDESVTDEEALAQNSSIDATDFDTAHVSDSECSSDIGADPSMLEMIMIKDVSSGTEVFNTYGLLGNAALLHRYGFTEQDNLYDIVNIDLDLVLKWCSSLFSGRHGRARVSLWRRLGYSACGIKNSEYFEISFDGEPQVELPILLYIMLLPDKAYHELDLSVSTAGKRDESSKTTLLYDKIYPNKSSNMSKKFLLTNQVCDALISLADMRESLYGSESIEDDIEALERCSLVSEKKVYHSSVLRISERKILQKLRNYASKPLNKMTNHSPRRKLRRTTKKS 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0689 503 MobiDBLite consensus disorder prediction 488 503 - -
Lal12g0689 503 ProSiteProfiles SET domain profile. 22 285 IPR001214 GO:0005515
Lal12g0689 503 PANTHER RIBOSOMAL LYSINE N-METHYLTRANSFERASE 3 7 482 - -
Lal12g0689 503 CDD SET_LSMT 23 299 - -
Lal12g0689 503 SUPERFAMILY SET domain 4 303 IPR046341 -
Lal12g0689 503 Pfam SET domain 33 285 IPR001214 GO:0005515
Lal12g0689 503 MobiDBLite consensus disorder prediction 481 503 - -
Lal12g0689 503 PIRSF RMS1_SET 1 484 IPR011383 GO:0016279|GO:0018026
Lal12g0689 503 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 7 482 - -
Lal12g0689 503 MobiDBLite consensus disorder prediction 208 230 - -
Lal12g0689 503 Gene3D set domain protein methyltransferase, domain 1 2 298 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0689 1 496 NAC Transcription Factor Family AT3G56570 53.172 1.01e-180 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lal12g0689 SET 1.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0689 K05302 - gmx:100794971 776.548