Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0682 ATGGCAACACGAAGATATGCTTTTGGAAGAGTAGATGAGGTTACTCACCCAGACTCAGTGAGAGCCACCATAGCTGAATTCATCTCTACTTTCATCTTTGTTTTTGCTGGAGAAGGCTCTATCCTTGCTCTTGACAAAATATACAAGATTCGAGGTTCATCATCAGCAAGTGAGTTAGTAGTAATTGCACTAGCACATGCATTTGGTCTATTTGCTGCAATATCAGCAAGCATGCATGTATCAGGTGGGCATGTGAATCCTGCAGTGACCTTTGGTGCTCTTATTGGTGGCAGAATCTCAGTTCTTAGAGCTGTTTATTACTGGATTGCTCAACTTCTTGGTTCTATTGTTGCTGCTCTCTTGTTGAGGCTTGGTACTAACAACATGAGACCAGAAGCATTCCATGTATCAGTGGGTCTTGGTGCAGCACACGGCCTTGTACTTGAAATTGCCATGACATTTGGTCTAATGTACATTGTCTATGCTACTGCAATTGATCCTAAAAGAGGCACAAATGGGTCACTTGCACCTTTAGCCATTGGGCTCCTTGTTGGGGCAAACATTCTCCTTGGTGGCCCATTTGATGGAGGATGCATGAACCCTGCTCGGGCTTTTGGGCCTGCTTTGGTGGGCTGGAGATGGAAGTACCATTGGGTCTTCTGGGTGGGCCCATTGCTTGGGTCAGCCCTTGCAGCACTCCTATATGAGTATGTTATTATCCCAACTGAGCCTCCTCATCCTCACCAACCTTTGGCTCCTGAAGATTACTAG 771 0.4578 MATRRYAFGRVDEVTHPDSVRATIAEFISTFIFVFAGEGSILALDKIYKIRGSSSASELVVIALAHAFGLFAAISASMHVSGGHVNPAVTFGALIGGRISVLRAVYYWIAQLLGSIVAALLLRLGTNNMRPEAFHVSVGLGAAHGLVLEIAMTFGLMYIVYATAIDPKRGTNGSLAPLAIGLLVGANILLGGPFDGGCMNPARAFGPALVGWRWKYHWVFWVGPLLGSALAALLYEYVIIPTEPPHPHQPLAPEDY 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0682 256 CDD MIP 21 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal12g0682 256 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 256 - -
Lal12g0682 256 TIGRFAM MIP: MIP family channel proteins 25 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal12g0682 256 Pfam Major intrinsic protein 14 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal12g0682 256 Gene3D Glycerol uptake facilitator protein. 4 245 IPR023271 -
Lal12g0682 256 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal12g0682 256 PRINTS Major intrinsic protein family signature 66 90 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal12g0682 256 PRINTS Major intrinsic protein family signature 103 122 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal12g0682 256 PRINTS Major intrinsic protein family signature 148 166 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal12g0682 256 PRINTS Major intrinsic protein family signature 181 203 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal12g0682 256 PRINTS Major intrinsic protein family signature 218 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lal12g0682 256 SUPERFAMILY Aquaporin-like 13 247 IPR023271 -
Lal12g0682 256 ProSitePatterns MIP family signature. 84 92 IPR022357 -
Lal12g0682 256 PANTHER AQUAPORIN-8 1 256 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0682 Lal-Chr12 5032028 5033535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0682 2 256 Major Intrinsic Protein MIP AT1G73190 68.182 1.61e-122 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0682 K09873 - gmx:100814469 426.017