Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0676 ATGGCTTATTCTTCTTCTAGAACCTTCTCCGCCAATTCAAACGATTACAAGCTTCTCGACGAAGTCGGTAACGGTTCCAGCGCCACCGTCTACCGCGCAATCTACCTCCCTAACAACCGCCAAGTGGCGGTTAAGTGTCTCGATCTAGATCGATGCAATAACAATTTCGATAACATAAGAAAAGAGGCTCAGACCTTGAGATTAATCGATCACCCTAACGTGGTTCGCGCTTATTGTTCCTTCGTTGTGGAACGGTGTCTATGGGTAGTGACGCCGTTCATGGCGCAGGGTTCTTGTTTGCACCTGATGAAGGCTGCGTACCCTGACGGATTTGAAGAAGCTGCAATTGCGAGTATATTGAAGGAAACTCTGAAAGCTTTGGCGTATCTTCATCGACAGGGACATATTCATCGCGATATTAAGGCTGGGAATATTTTGGTTGATGATAATGGTGAAGTGAAACTCTCTGATTTCGGTGTTACAGCTTGCATCTTTGATAACGGTGATAGACAGCGTTCTCGGAACACTTTTGTTGGAACTCCTTGTTGGATGGCACCAGAGGTATTGCAACCTGGAACTGGTTATAATTCCAAGGCTGATATTTGGTCTTTTGGGATCACGGCACTGGAGTTGGCTCATGGTCATGCCCCCTTTTCAAAATATCCTCCGATGAAGGTTCTTTTAATGACCATCCAGAATGCCCCTCCAGGACTTGATTATGATCGTGATAGAAAGTTCTCCAAGTCTTTTAAGGAAATGGTTGCTATGTGTCTGGTTAAAGATCAAACAAAGAGGCCTTCAGTAGACAAGTTACTGAAGCACTCCTTCTTCAAACATGCTAAGCCTCCTGAGCTGTCTGTGAAGAGGTTATTTGCTGACTTACCACCTCTTTGGGATCGTGTAAAATCCCTCCAGATCAAAGATGCAGCTCAACTTGCACTGAAGAGGATGCCTTCTGCTGAAGAAGAAGCATTATCTCGGAGTGAATATCAACGAGGAGTTAGTGCGTGGAACTTCGATATTGATGATTTGAAAGCTCAAGCTTCATTGGTGAGGGATGATGATGATATTGCAGCGATAGGGGAAGAATTTGAAAACAAACTCTTCACCGGTTACAAGGATACAACCACTGATTCCCAGTTTAGCAAAGGCAAAATGAATTCAGATAACTCGCAACAAGATGAGTTCACGTTACAAGTAGATGGTAATGACATACCACAGATTGAGAAGAGAAATGGATTGATTGTCGAGACAACACCATCTATCTTACAGAAGGATATGGGAACAAGCAAGATTAAAAGTCAACCATTGAAAATTGGTAAAACTCGAAGTGGGCCACTTCTGCCAGGCAAGGTTCTTAGTCATTCTTTGCCAGAAAGAGGGCCTGCATTTGAAAGGTTTGAGAATCAAAATCAGTCTTTAGGTGTGAAAAGTAATCGTGAATTAAGACAAGCTTCTAATCAGAGTGGCCCATTAATGCTTCCCAGCCGTGCTTCGGCAAATAGTTTATCTGCTCCAATAAGATCTTCTGAAGGATTCAGAGATTTGTTAGACAATAAGTCTAAGGCTAATCTAGTGCAAGTTAAAGGACGATTCTCAGTGACATTGGAAAATTTAGATCAGGATCTTCCTGTAAATTCAGTATCACACCGAACACCACAGGAATCACCACTGAGGAAATCTGCCAGTGTCAGTGATTGGATGTTGGATCCTAAACAAATGCCAAGTGGTCAGTCTTCCACAGATTCTGTCAATACAAATAATTCTGCATCAGTTCTCATAACTCACCTTCAGAATCTTTTCCAGCAGACATCTATTCAACAGGATCTTATAATGAATTTGTTGAATAGTTTGCAGCCTGCCGAGGCAATAGATGTTTCTCAGAATGGAAAAATGCCAACTTTATCTTGCAGTCCAGGGAACAATGGAATTGTTGATACAGCAGCTTCAGAAAGGGAACAATTTCTGATGGCCAAAATTGCAGAACTTAAGGCTGGAGTGATTACTCTGACTGATGAACTAGCTTCTGAGAAATTAAAATGCAAGCTGTTGCAACAACAGCTAAATGCTGCCTAA 2076 0.4229 MAYSSSRTFSANSNDYKLLDEVGNGSSATVYRAIYLPNNRQVAVKCLDLDRCNNNFDNIRKEAQTLRLIDHPNVVRAYCSFVVERCLWVVTPFMAQGSCLHLMKAAYPDGFEEAAIASILKETLKALAYLHRQGHIHRDIKAGNILVDDNGEVKLSDFGVTACIFDNGDRQRSRNTFVGTPCWMAPEVLQPGTGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDRKFSKSFKEMVAMCLVKDQTKRPSVDKLLKHSFFKHAKPPELSVKRLFADLPPLWDRVKSLQIKDAAQLALKRMPSAEEEALSRSEYQRGVSAWNFDIDDLKAQASLVRDDDDIAAIGEEFENKLFTGYKDTTTDSQFSKGKMNSDNSQQDEFTLQVDGNDIPQIEKRNGLIVETTPSILQKDMGTSKIKSQPLKIGKTRSGPLLPGKVLSHSLPERGPAFERFENQNQSLGVKSNRELRQASNQSGPLMLPSRASANSLSAPIRSSEGFRDLLDNKSKANLVQVKGRFSVTLENLDQDLPVNSVSHRTPQESPLRKSASVSDWMLDPKQMPSGQSSTDSVNTNNSASVLITHLQNLFQQTSIQQDLIMNLLNSLQPAEAIDVSQNGKMPTLSCSPGNNGIVDTAASEREQFLMAKIAELKAGVITLTDELASEKLKCKLLQQQLNAA 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0676 691 Gene3D Transferase(Phosphotransferase) domain 1 97 320 - -
Lal12g0676 691 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 5 690 - -
Lal12g0676 691 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 5 690 - -
Lal12g0676 691 MobiDBLite consensus disorder prediction 469 497 - -
Lal12g0676 691 MobiDBLite consensus disorder prediction 545 561 - -
Lal12g0676 691 SUPERFAMILY Protein kinase-like (PK-like) 14 326 IPR011009 -
Lal12g0676 691 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0676 691 MobiDBLite consensus disorder prediction 545 584 - -
Lal12g0676 691 Gene3D Phosphorylase Kinase; domain 1 5 93 - -
Lal12g0676 691 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Lal12g0676 691 CDD STKc_OSR1_SPAK 14 277 - -
Lal12g0676 691 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0676 691 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0676 Lal-Chr12 4961908 4969395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0676 7 690 MAP Kinase Kinase Kinase Kinase AT4G24100 62.302 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Lal12g0676 Pkinase 7.3e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0676 - - gmx:100783699 1038.87