Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0664 ATGAGGATGAACAACCACAACTACTACTTACTAATGTGCTTCACTACTTTATCACTTTACATCATTTTAAGTCCATGGATCTCTATTGAAGCTGCCCCTACACCCTCTCTTGTCACATACCTCCCTAACTTTAAGGCCACTTTTCCATCCAAACACTACTCCGGATATATAAGCATTGATGGAAATGGTGAAAATGGGAAGAACTTGTTCTACTACTTTGTAAGTTCAGAAAGAAACCCAGAGAAGGATCCAGTTGTTCTATGGTTGAATGGGGGACCAGGGTGCTCAAGCTTTGATGGCTTCATTTATGAGCATGGACCATTCAACTTCGAGGCAGCCAAAACAAAAGGGAATCTTCCCACCTTACATATCAATCCATATAGTTGGTCTAAGGTTTCCAATATTATTTATTTGGATTCACCTGCTGGAGTTGGCCTCTCTTACTCCAAGAATACTAGTAATTACATTACTGGTGACCTTCAAACTGCTTCTGATACCCATGCTTTCCTCTTCAAGTGGTTTGAGCAATTCTCTGAATTCCTTGATAACCCATTTTATATTTCTGGAGAGTCTTATGCTGGAATATATGTGCCCACTTTAGCCTATGAAGTAGTCAAAGGAATTAGGGGTAGTATTAAACCCGTGATCAACTTTAAGGGTTACATAATTGGAAATGGTGTCACGGATGGAAAATTTGACGGCATTAATGCTTTAATTCCATTTGTGCATGGAATGGGTCTCATATCCGACAATAACTACGAGGATTTACAAGCTTATTGCAAAGGACAGTACCATAATGATGATAATGTAAAGTGTAACGAGAATATCGAAAAGGTTTACAAGGCTATTGATGGGCTTAACGTGTACGATATACTAGAGCCATGCTTCCATAACCCAGAAGCTGAAGCTGCCAAAGGAAATAGAACTAGTTTGCCATTGAGTTTCCAACAATTAGGGGCTACAGACAAGCCTCTACCTGTGAGAAAGAGGATGTTTGGTCGAGCTTGGCCCTTTCTAGCACCTGTTCAACAAGGCCTCCTTCCATTATGGCCCCAATTATTGGCTCAATTTAGGCATGTTCATTGTGTTAACGATGAAGTAGCAAGTTTATGGCTAAACAATGCAGAAGTGAGGAAAGCCATTCATGCTGAGCAGGAAAGTGTGGCAGGTCCATGGGAAATATGCACAGATAGGATACAGTATTATGGTAATGCTGGAAGCAGCATGATTCCTTACCACAAGAACCTAACCAAACTGGGCTATCGAGCACTTATTTTCAGTGGGGATCATGATATGTGTGTTCCATTTACCGGAAGTGAGGCTTGGACTCGTTCTATGGGATATAAGATTGTCGATGAATGGAGACCATGGACCTCTAATGACCAAGTTGCTGGATACTTGCAAGCATACGACCACAACCTCATTTTCCTCACCATCAAGGGAGCTGGACACACAGTCCCAGAATATAAGCCCAGGGAGGCATTGGATTTTTACACTAGATGGTTGGAAGGAAAACCAATATAG 1524 0.414 MRMNNHNYYLLMCFTTLSLYIILSPWISIEAAPTPSLVTYLPNFKATFPSKHYSGYISIDGNGENGKNLFYYFVSSERNPEKDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAAKTKGNLPTLHINPYSWSKVSNIIYLDSPAGVGLSYSKNTSNYITGDLQTASDTHAFLFKWFEQFSEFLDNPFYISGESYAGIYVPTLAYEVVKGIRGSIKPVINFKGYIIGNGVTDGKFDGINALIPFVHGMGLISDNNYEDLQAYCKGQYHNDDNVKCNENIEKVYKAIDGLNVYDILEPCFHNPEAEAAKGNRTSLPLSFQQLGATDKPLPVRKRMFGRAWPFLAPVQQGLLPLWPQLLAQFRHVHCVNDEVASLWLNNAEVRKAIHAEQESVAGPWEICTDRIQYYGNAGSSMIPYHKNLTKLGYRALIFSGDHDMCVPFTGSEAWTRSMGYKIVDEWRPWTSNDQVAGYLQAYDHNLIFLTIKGAGHTVPEYKPREALDFYTRWLEGKPI 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0664 507 ProSitePatterns Serine carboxypeptidases, histidine active site. 474 491 IPR033124 GO:0004185
Lal12g0664 507 ProSitePatterns Serine carboxypeptidases, serine active site. 187 194 IPR018202 GO:0004185
Lal12g0664 507 PANTHER CARBOXYPEPTIDASE 18 506 - -
Lal12g0664 507 SUPERFAMILY alpha/beta-Hydrolases 38 506 IPR029058 -
Lal12g0664 507 Gene3D - 362 400 - -
Lal12g0664 507 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 137 IPR001563 GO:0004185|GO:0006508
Lal12g0664 507 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 148 IPR001563 GO:0004185|GO:0006508
Lal12g0664 507 PRINTS Carboxypeptidase C serine protease (S10) family signature 173 198 IPR001563 GO:0004185|GO:0006508
Lal12g0664 507 PRINTS Carboxypeptidase C serine protease (S10) family signature 474 487 IPR001563 GO:0004185|GO:0006508
Lal12g0664 507 Pfam Serine carboxypeptidase 42 504 IPR001563 GO:0004185|GO:0006508
Lal12g0664 507 Gene3D - 409 504 - -
Lal12g0664 507 Gene3D alpha/beta hydrolase 31 321 IPR029058 -
Lal12g0664 507 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 18 506 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0664 Lal-Chr12 4835381 4842357 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0664 367 507 Calmodulin-binding Proteins AT2G22960 47.518 1.08e-39 140