Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0662 ATGACCCAACATAGTATAGGTGAGAGGTCTGCTCCTCGTGAAGGTCCAAGAAGTGTAGTTCGAATTCAGAGCCAAGAGAACATACCCGATGATGGTTACACATGGCGTAAGTATGGACAAAAGATGGTCAAAGGAAATTCACACAGTCCTAGGTGCTACTACAGATGCACTTTCAGTGGATGCTATACAAGGAAACAAGTGGAAAGGTGTGCTGATGATGCTAGATATGTGATAACCACCTATGATGGGAAGCATAACCATCAGCTTCCTCCACCCAAAGGAAAAATTCACATGAATGAATTTGCTGAATTGAACAATAATGATACTTTTCTTTTGCCCAATATAATTGCAACTCTCAGTGATCATTCAGAGTCTGCTTCCTCTGATACTCCTCATCATGCTGCTGGTGATGGATCTGCAGTTTCAGCTTCTTCTGCCACTGATGCAGTGTTACAGTCACCATATACATTTGACCTGAATCTTCCACCACCTCATGAACATGATGATAGTGCCTCAACTGAGACTGAGATTTGA 534 0.4232 MTQHSIGERSAPREGPRSVVRIQSQENIPDDGYTWRKYGQKMVKGNSHSPRCYYRCTFSGCYTRKQVERCADDARYVITTYDGKHNHQLPPPKGKIHMNEFAELNNNDTFLLPNIIATLSDHSESASSDTPHHAAGDGSAVSASSATDAVLQSPYTFDLNLPPPHEHDDSASTETEI 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0662 177 Pfam WRKY DNA -binding domain 30 88 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal12g0662 177 MobiDBLite consensus disorder prediction 1 25 - -
Lal12g0662 177 SUPERFAMILY WRKY DNA-binding domain 22 90 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal12g0662 177 MobiDBLite consensus disorder prediction 162 177 - -
Lal12g0662 177 Gene3D WRKY domain 14 91 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lal12g0662 177 SMART WRKY_cls 29 89 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal12g0662 177 ProSiteProfiles WRKY domain profile. 24 90 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lal12g0662 177 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 4 130 - -
Lal12g0662 177 MobiDBLite consensus disorder prediction 140 154 - -
Lal12g0662 177 MobiDBLite consensus disorder prediction 122 177 - -
Lal12g0662 177 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 4 130 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0662 Lal-Chr12 4820040 4821972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0662 16 93 WRKY Transcription Factor Family AT5G07100 61.538 9.91e-30 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lal12g0662 WRKY 1.6e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0662 - K13424 lang:109344587 295.819