Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0656 ATGGAGCCTCATCACTTTGTGGTTCAACTTCCACTGTTGTTCCTAATTACTCATTGGCTTTTATTGGCTCTCTATGCCAAAGGTGAAAGTTCTACTACATACATTGTTCATATGGACAAGTCCCTCATGCCACAAGTCTTTGAAAGGCATCATGATTGGTACAAATCCACCCTTCATTCCATAAACTTAGCTACAGTTAATCAATCATCAAACTCCAAGAAAACAAAGAAATTAGTTTACACTTACAACCATGCCATGCATGGATTCAGTGCAGTACTATCTTCATATGAGGTAGAGACCCTAAAGAAAACACATGGCTTTGTCTCAGCTTATCCAGATAGGTCTGCTACCATAGACACCACTCACACCTTTGAATTCCTCTCCCTTGGTTCCCCTACTGGCCTATGGCATGCTTCAAATTTTGGTGAAGATGTCATTGTTGGTGTTATTGACTCAGGTGTGTGGCCTGAGAGTGAGAGCTTCAAAGATGATGGTATGACAAAGAAAATCCCATCTAAATGGAAAGGAACATGTGAGTCAGGACAGGACTTTAACACCTCAATGTGCAACTTCAAGTTGATTGGAGCAAGGTATTTCAACAAGGGTGTGATTGCAGCAAAACCAAATGTCACAATCAGCATGAACTCACCTAGAGACACAAAAGGACATGGTAGCCACACATCATCAACAGTTGGTGGCAACTATGTTAATAATGTCTCCTTTTTTGGCTATGCTAAAGGTGTAGCTATAGGTATTGCACCAAGAGCTAGACTTGCAATGTACAAGGTTATTTGGGAAGAGGGGCACCAAGCTTCTGATGTACTTGCTGGAATGGACCATGCCATTGCTGATGGTGTTGATGTTATTTCCATCTCAATGGGTTTTAATAGTGTTCCACTTTATGAGGATCCTGTAGCAATAGCTTCTTTTGCAGCAATGGAAAAAGGGGTGCTAGTTTCATCTTCAGCAGGTAATGAAGGTCCTAAACTTGGAACCTTGCATAATGGTATCCCCTGGGCTCTCACAGTGGCTGCAGGAACCATTGACCGCACATTTGAAAGCTTAGTACTTGGAAATGGCCAAACCATTATAGGTTGGGCATTATTTCCTGCAGAAAATACTATACTGGAAAATTATCCACTTATTTACAACAAGACTATATCAGCATGCAATTCAGTGGAGTTGTTATCTCAAGTAGCAGGAAAAGGTATCATTATATGTGATGCCTTAGAATCAGTGTCTGTGTTAAACCAAACAAGGTTTATTACATTGGCAAGTGTGATAGGAGCTGTGTTTATCTCTGATGATCCTAAGCTAATTGAACTAAGACATTTGCACTCACCAAGTATTGTAATCAGCCCAAAAGATGGACCTTCTGTAATCAAATATGCAAAAAATGCTAAAAACAACAACCCTTTTGCTAGCATAAAATTTCAACAAACATTTGTTGGAATAAAGCCAGCACCAGCTGCAGCATTTTACACTTCAAGGGGTCCTTCACCAAGCTACCCTGGTGTCTTAAAGCCTGATATAATGGCACCTGGAACAAATGTCCTAGCTGCTTTTATTCCTAAAATACCATCAGCCATAATTGGAACAAATGTGTTTCTGTGGAGTAATTACAATTTACTCTCTGGAACTTCAATGGCATGTCCACATGCTTCTGGTGTTGCTGCACTACTTAAGGCTACACATCAAGATTGGAGTCCAGCTGCTATAAGGTCAGCATTAATCACCACAGCAAATCCACTTGATAATACTCAAAATCCAATAAGGGATAATGGTAAACCTTTTCAACATGCTTCACCTTTGGCTATTGGAGCTGGTCAAATTGATCCTAATGGAGCTACTGATCCAGGTTTGATATATGATGCAACACCACAAGACTATGTTAACCTTCTCTGTGCATTGGGCTACACACAAAAGCAAATCTTGACAATCACAAGATCAAGATCTTATAACTGTGCTAACCCTTCTCTTGACCTTAACTACCCTTCATTTATAGCTTTTTATGGTAACAAAACAATGTCAGTGGTGCAAAAGTTTGAGAGGACTGTGACTAATGTTGGAAATGGTGCTGCTACATATAGAGTCAAGGTGACTAATCCTAAGGGCTCTGTGGTTACAGTGTCACCTGAGACACTAGAATTTGGCTTTAAGAATGAGAAGAAGAGTTACACTGTTGTGATAAAGTACAAGAGGTTCAGCAAAAGGGAAGAAGATGTGTCATTTGGGGACATAGTTTGGGTTGAAGATGGTGCTGCACACACTGTTAGAAGTCCTATAGTAGTGGCACCAAATTTTCTTTGA 2310 0.4017 MEPHHFVVQLPLLFLITHWLLLALYAKGESSTTYIVHMDKSLMPQVFERHHDWYKSTLHSINLATVNQSSNSKKTKKLVYTYNHAMHGFSAVLSSYEVETLKKTHGFVSAYPDRSATIDTTHTFEFLSLGSPTGLWHASNFGEDVIVGVIDSGVWPESESFKDDGMTKKIPSKWKGTCESGQDFNTSMCNFKLIGARYFNKGVIAAKPNVTISMNSPRDTKGHGSHTSSTVGGNYVNNVSFFGYAKGVAIGIAPRARLAMYKVIWEEGHQASDVLAGMDHAIADGVDVISISMGFNSVPLYEDPVAIASFAAMEKGVLVSSSAGNEGPKLGTLHNGIPWALTVAAGTIDRTFESLVLGNGQTIIGWALFPAENTILENYPLIYNKTISACNSVELLSQVAGKGIIICDALESVSVLNQTRFITLASVIGAVFISDDPKLIELRHLHSPSIVISPKDGPSVIKYAKNAKNNNPFASIKFQQTFVGIKPAPAAAFYTSRGPSPSYPGVLKPDIMAPGTNVLAAFIPKIPSAIIGTNVFLWSNYNLLSGTSMACPHASGVAALLKATHQDWSPAAIRSALITTANPLDNTQNPIRDNGKPFQHASPLAIGAGQIDPNGATDPGLIYDATPQDYVNLLCALGYTQKQILTITRSRSYNCANPSLDLNYPSFIAFYGNKTMSVVQKFERTVTNVGNGAATYRVKVTNPKGSVVTVSPETLEFGFKNEKKSYTVVIKYKRFSKREEDVSFGDIVWVEDGAAHTVRSPIVVAPNFL 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0656 769 Gene3D - 634 766 - -
Lal12g0656 769 CDD Peptidases_S8_3 117 582 IPR034197 -
Lal12g0656 769 CDD PA_subtilisin_like 354 476 - -
Lal12g0656 769 Gene3D - 349 483 - -
Lal12g0656 769 ProSitePatterns Serine proteases, subtilase family, serine active site. 546 556 IPR023828 -
Lal12g0656 769 Gene3D Peptidase S8/S53 domain 144 630 IPR036852 GO:0004252|GO:0006508
Lal12g0656 769 ProSiteProfiles Serine proteases, subtilase domain profile. 121 617 - -
Lal12g0656 769 Pfam Peptidase inhibitor I9 33 116 IPR010259 -
Lal12g0656 769 Pfam Fibronectin type-III domain 661 764 IPR041469 -
Lal12g0656 769 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 765 IPR045051 -
Lal12g0656 769 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 118 IPR037045 -
Lal12g0656 769 SUPERFAMILY Subtilisin-like 120 621 IPR036852 GO:0004252|GO:0006508
Lal12g0656 769 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Lal12g0656 769 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Lal12g0656 769 PRINTS Subtilisin serine protease family (S8) signature 545 561 IPR015500 -
Lal12g0656 769 Pfam Subtilase family 142 587 IPR000209 GO:0006508|GO:0008236
Lal12g0656 769 PANTHER OS01G0868800 PROTEIN 33 765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0656 Lal-Chr12 4770815 4773613 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0656 31 769 Subtilisin-like Serine Gene Family AT5G67090 41.897 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0656 - - gmx:100806072 1184.09