Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0651 ATGGAACCCAACAACAACAACAACCTCAGCTCATACTTCCACCACTTCAACAACCAGCACCAGTCACCGTCCAATGGGGTGTTGCCACCAACAACTGATGGGTCCCACTCTCACACGCTCTTCCCTCAAACCACCGCAACTACTGTAGTACCTTCTCCTCCTCCTCCCTCTGCAGTGTCCTCACAATCTCAATTGCAAAAGAAGAAACGTGGGAGGCCACGAAAATACTCTTCCCCTGAACAAGCCCTTGCTGCTAGGAAAGCCGCTACGACGTCGTCTTCTCCCGCTCCTCCTACCATCTCTGTTTCTTCTTCCAATAATTCATTTCACTCTTTTTCTATAGGCACTGCAGGAAAAGATTTCAGTACACAGTTTATTACTGTTCTCGCCGGTGAGGATGTTGGCCAAAAAATTATGTTGTTCATGCAACAAAGCAGGCGTGAGATATGCATTCTGTCGGCATCGGGTTCCATCTCTAATGCCTCTCTTAGTCAGCCAGCAACGTCAGGAGGCAGTATTTCATATGAGTGCACAAGGCTCCCTCCCTTTTGGAGTTTAAGGAGGTTTCAGAATCAGATGCACACAAGGCCTAGTGCATCTGATGCATACGGTTGGTTTGAGATTATTTCACTTAATGGTTCCTATATTCGTAATGAAGTTGGAAGTCGGTCTGGTGGTCTCAGTGTATGCTTATCTAGTACTGATGGGAAAATCATAGGTGGTGGAGTTGGTGGACCCCTTAAAGCGGCTGGCCCAGTTCAGGTCGTCCTTGGTACATTCACGATTGACCCCAAGAAGGATGCAAGTGCTGGAATTAAAGGTGATGCTGCTTCCAGTAAGTTGCCCCCACCACCGGTCGGTGAATCAGTATCAAGTTTTGGCTTCGGCCGAGCAGTTGACTCATCTGCTGGGAACCCAATCAGGGGAAATGAGGAGCATCAAACTATTGGAGGAAGTCACTTCATGATTCAACAAGGTGGTATGCAAGGGACACAATCTCGTCCCTCTGACTGGGGAGGTCACCCAGATTCAAGAAACGTTGGCTTTGAACTGACAGGAAGAACAGGTCATGGAGCACAACAATCACCTGATGAGAATGGGGACTATGAGTAG 1113 0.4807 MEPNNNNNLSSYFHHFNNQHQSPSNGVLPPTTDGSHSHTLFPQTTATTVVPSPPPPSAVSSQSQLQKKKRGRPRKYSSPEQALAARKAATTSSSPAPPTISVSSSNNSFHSFSIGTAGKDFSTQFITVLAGEDVGQKIMLFMQQSRREICILSASGSISNASLSQPATSGGSISYECTRLPPFWSLRRFQNQMHTRPSASDAYGWFEIISLNGSYIRNEVGSRSGGLSVCLSSTDGKIIGGGVGGPLKAAGPVQVVLGTFTIDPKKDASAGIKGDAASSKLPPPPVGESVSSFGFGRAVDSSAGNPIRGNEEHQTIGGSHFMIQQGGMQGTQSRPSDWGGHPDSRNVGFELTGRTGHGAQQSPDENGDYE 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0651 370 MobiDBLite consensus disorder prediction 84 105 - -
Lal12g0651 370 MobiDBLite consensus disorder prediction 1 47 - -
Lal12g0651 370 ProSiteProfiles PPC domain profile profile. 118 284 IPR005175 -
Lal12g0651 370 CDD DUF296 126 260 IPR005175 -
Lal12g0651 370 MobiDBLite consensus disorder prediction 325 370 - -
Lal12g0651 370 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 1 176 - -
Lal12g0651 370 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 204 364 - -
Lal12g0651 370 MobiDBLite consensus disorder prediction 267 288 - -
Lal12g0651 370 MobiDBLite consensus disorder prediction 1 105 - -
Lal12g0651 370 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 176 IPR039605 GO:0003680
Lal12g0651 370 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 204 364 IPR039605 GO:0003680
Lal12g0651 370 Pfam Plants and Prokaryotes Conserved (PCC) domain 125 260 IPR005175 -
Lal12g0651 370 SUPERFAMILY AF0104/ALDC/Ptd012-like 120 261 - -
Lal12g0651 370 MobiDBLite consensus disorder prediction 325 339 - -
Lal12g0651 370 Gene3D - 123 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0651 Lal-Chr12 4747478 4751288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0651 33 370 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 40.533 1.15e-68 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0651 - - lang:109345383 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0651 12 4747478 4751288 Lal12g0651 12 4747478 4751288 ECH