Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0624 ATGGATAGGGTCTTCTCAGTCGAAGAAATCGCCGAACACTTCTGGTCGCCGGCGATTTCCTCTTCCTTCTCCTCCGGCGCCGCCGGCAACGAATCATCCAAGATGAACCGCAGTGCTTCCGAGTGGGCCTTCCAACGCTTCCTCCAGGAAGCCACATCCGCATTATTATCACCTTCTTCTTCATCCGTTGCTGATCGAAACGATGGCGTCGTTTTTGTCGAAACCAATAGCCACCAACCAAAACTAGATCGCACCCAGAGCGTGGATGCCACGCCCCTTCCGAAAAACGGTGCCGTTTTGGGCAATGGGCCCACTGTTCCTCCTCCTGGGTCTTTTGATTCGGAAGAGTATCAGGCTTTCTTGAAGAGCAAGCTAGATCTCGCGTGCGCTGCTGTCGCCGTTGTTAGGGGTTCTTTGGTCAAATCTCAAGATGAAGCCACTTTTCCGGACAGTGTACCACAGCCATTGTCTAATCCTTCTCAAGTTGGACCTCAGCCTACTTTTACAGGATCTGGTCCTTCTGGAAATGACCCACCTAAATTGCAAGACAAAGATGCCAAAGCTCCAGTTGGGATTCCTTCCATACCTGCCATGCAAAAGAAACCTGCTGCTGTAATCAGGCCATCAACAAGTGGATCATCAAGAGACCTGACGGATGATGAGGAAATGGAGGGAGAGACAGATATGAACGATAACATGGACCCTGCTGATAACAAGGACCCAGCTGATGTGAAACGAGTAAGGAGGATGCTTTCCAATAGGGAGTCAGCTAGACGCTCGAGAAGAAGAAAGCAGGCTCATTTAACAGACCTGGAGAAACAGGTGAATCAATTAAGAGGTGAAAATTCTTCCTTGTTAAAGCGCCTTACTGATATAAGCCATAAGCACAATGAATCTGCTGTTGACAACAGAGTATTGAAAGCTGATATTGAAACATTAAGAGCAAAGGTGAAGATGGCCGAAGAGACTGTAAAAAGAATTACTGGGTTGAACCCAATGTTGCATGCCATGTCTGATATATCAACCATGAACATGCCTTCATTTAATGGAAGCCCTTCTGACACATCAGCTGATGCAGCTGTTCCTGTGCATGACAATAACCCAAATCATCATTTTTATCAACAATCCACATCTAATAATCCCATACCCAGTCATGACACAAGAGTCAATAATAATGGGTTGAGGGACATTCCTTCTTCAATTGAAAATGTGCAGCGGAGTGCAGCAGCAGCAGCCACGGTGGGAGGGAGCAAGATGGGTCAGCCAACTTCCCTATGTCCGGTGGCTAGCTTGGAACACCTTCAGATGCAGATTCGCGGTGGTGTGGACTCTACCGGAGGACCATCCAATGGAGAGATTAATAGAGTTACCAAGCCAAATTGA 1383 0.4751 MDRVFSVEEIAEHFWSPAISSSFSSGAAGNESSKMNRSASEWAFQRFLQEATSALLSPSSSSVADRNDGVVFVETNSHQPKLDRTQSVDATPLPKNGAVLGNGPTVPPPGSFDSEEYQAFLKSKLDLACAAVAVVRGSLVKSQDEATFPDSVPQPLSNPSQVGPQPTFTGSGPSGNDPPKLQDKDAKAPVGIPSIPAMQKKPAAVIRPSTSGSSRDLTDDEEMEGETDMNDNMDPADNKDPADVKRVRRMLSNRESARRSRRRKQAHLTDLEKQVNQLRGENSSLLKRLTDISHKHNESAVDNRVLKADIETLRAKVKMAEETVKRITGLNPMLHAMSDISTMNMPSFNGSPSDTSADAAVPVHDNNPNHHFYQQSTSNNPIPSHDTRVNNNGLRDIPSSIENVQRSAAAAATVGGSKMGQPTSLCPVASLEHLQMQIRGGVDSTGGPSNGEINRVTKPN 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0624 460 SMART brlzneu 241 305 IPR004827 GO:0003700|GO:0006355
Lal12g0624 460 Pfam Basic leucine-zipper C terminal 312 442 IPR020983 -
Lal12g0624 460 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 248 263 IPR004827 GO:0003700|GO:0006355
Lal12g0624 460 MobiDBLite consensus disorder prediction 250 269 - -
Lal12g0624 460 MobiDBLite consensus disorder prediction 146 245 - -
Lal12g0624 460 SUPERFAMILY Leucine zipper domain 245 294 IPR046347 GO:0003700|GO:0006355
Lal12g0624 460 MobiDBLite consensus disorder prediction 146 176 - -
Lal12g0624 460 MobiDBLite consensus disorder prediction 440 460 - -
Lal12g0624 460 Gene3D - 244 299 - -
Lal12g0624 460 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 243 295 IPR004827 GO:0003700|GO:0006355
Lal12g0624 460 PANTHER BASIC LEUCINE ZIPPER 63 1 434 - -
Lal12g0624 460 Coils Coil 254 288 - -
Lal12g0624 460 PANTHER BZIP TRANSCRIPTION FACTOR 1 434 - -
Lal12g0624 460 MobiDBLite consensus disorder prediction 78 102 - -
Lal12g0624 460 Pfam bZIP transcription factor 244 293 IPR004827 GO:0003700|GO:0006355
Lal12g0624 460 MobiDBLite consensus disorder prediction 442 460 - -
Lal12g0624 460 Coils Coil 303 330 - -
Lal12g0624 460 MobiDBLite consensus disorder prediction 78 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0624 Lal-Chr12 4517973 4522990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0624 1 334 bZIP Transcription Factor Family AT4G02640 38.348 1.54e-47 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal12g0624 bZIP_C 3.2e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0624 K25784 - gmx:100170702 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0624 12 4517973 4522990 Lal12g0624 12 4517973 4522990 ECH
Lal12g0624 12 4517973 4522990 Lal13g0703 13 4567053 4572623 LSH