Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0621 ATGATTCATAAATTTCTCATTTCAAGATTAACTGCATCACTCACTCAGCGCAACCGTACCCAAATCCAATTGGGTTCTCTGCTACCACACAATGCTTTCATTTTCTTTAACCAATTCACCTCAGGTTCCACTTCTAAACCCGAATCACAATCAAAACATCATAAAGCTCGCACCTTTACTGTTTCTTACCTCATCAACTCATGTGGGTTGTCTCCTGATTTGGCTCTCAAACTCTCCAAAAGGGTTAAATTGAAAAACCATGATGGCCCAAATGCTGTTCTTGATCTTCTAAAGAATTATGGTTTTTCCAAAACACAGTTATCTATCTTTATCAAAAGATTACCTAAAGTGCTTGTAGCTGAACCTGATAAAATCCTTCTCCCGAAACTAAAGTTCTACCAATCTATTGGGGTTTCAAAAACTGACCTCCCCAAAATCCTCATTGGAAACTCTTCATTATTAACAATTGGCTTGAAGAACAACATTATCCCTCGTTATAACGTCATTAGGAGCCTCGTTCGCAGCGATGAGGAAGTAGTTTCAACTTTGAAGCATGGGCCGCGGTACTTTCACGGTTATGAGGTAATAAATGATTCAGTTCAGAATGTAGAGGTTTTGAGACAGCTTGGTTTGCCTCAAAGTTCCATCTCTTTGTTGGTAACCAATTTCCCTAGTGTAGTGTTTATCAAGCATTCAAAGTTCAATGAGGCTGCTGAGACAGTGAAAGAAATGGGGTTTGATCCTTCGAAAACTAATTTTGTTATAGCACTTCAAGTATTTGCAAAGATGGATAAGGCAATGTGGAATGCGAAATTAGAGATTTTTGAGAGGTGGGGGTGGTCCAGAGATATCTGTTTATTGGCTTTCAAAAAGTATCCCCAATATATGATGGTTGCAGAAAAGAAGATTATGAAAACACTTAGCTTCTTGATGGAGGATATGAACTGTTCCTTAGAAGACATTGCTAGATGCCCAGGGATTTTGAACCGCAACCTGGAGAAGACATTAATGCCTAGATGTGCAGTTGTTAAAGTTTTGAAGTCACGGGGTTTGGTAAAGAATGATTTGCTCATAGGTAGCTTTATGCTGATTGCTGAGAAAACTTTTGTGGAGAAATATGTGACCCGATTTCAGAATAATGTGCCTCTACTATTGGACGTGTATGAAGGTAAAAAAAAGTTAGATTGA 1188 0.3847 MIHKFLISRLTASLTQRNRTQIQLGSLLPHNAFIFFNQFTSGSTSKPESQSKHHKARTFTVSYLINSCGLSPDLALKLSKRVKLKNHDGPNAVLDLLKNYGFSKTQLSIFIKRLPKVLVAEPDKILLPKLKFYQSIGVSKTDLPKILIGNSSLLTIGLKNNIIPRYNVIRSLVRSDEEVVSTLKHGPRYFHGYEVINDSVQNVEVLRQLGLPQSSISLLVTNFPSVVFIKHSKFNEAAETVKEMGFDPSKTNFVIALQVFAKMDKAMWNAKLEIFERWGWSRDICLLAFKKYPQYMMVAEKKIMKTLSFLMEDMNCSLEDIARCPGILNRNLEKTLMPRCAVVKVLKSRGLVKNDLLIGSFMLIAEKTFVEKYVTRFQNNVPLLLDVYEGKKKLD 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0621 395 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 27 391 - -
Lal12g0621 395 PANTHER CGI-12 PROTEIN-RELATED 27 391 IPR003690 GO:0003690|GO:0006355
Lal12g0621 395 SMART mt_12 217 247 IPR003690 GO:0003690|GO:0006355
Lal12g0621 395 SMART mt_12 318 352 IPR003690 GO:0003690|GO:0006355
Lal12g0621 395 SMART mt_12 144 175 IPR003690 GO:0003690|GO:0006355
Lal12g0621 395 SMART mt_12 286 317 IPR003690 GO:0003690|GO:0006355
Lal12g0621 395 SMART mt_12 108 139 IPR003690 GO:0003690|GO:0006355
Lal12g0621 395 Pfam mTERF 263 369 IPR003690 GO:0003690|GO:0006355
Lal12g0621 395 Pfam mTERF 94 311 IPR003690 GO:0003690|GO:0006355
Lal12g0621 395 Gene3D Transcription termination factor 3, mitochondrial 159 380 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0621 Lal-Chr12 4506890 4508077 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lal12g0621 mTERF 1.4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0621 K15032 - gmx:106799612 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0621 12 4506890 4508077 Lal12g0621 12 4506890 4508077 ECH