Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0607 ATGGACTGCAACAAGGATGAGGCTACGAAGGCCAAGCAAATTGCTGAAAGTAGAATGCAATGTGGTGACTTTGTAGGAGCACTGAAGTTTGCTACAAAGGCCAAAAATATGTATGCTGATGTTGAAAACATTTCTAAGATCCTTACAGTTTGTGAGGTTCATAGTGCTGCACAGAACAAGCTATCTGGGTCTGGCATGGACTGGTATGGAATTCTTCAAGCTGAACGATTTTCTGATGGTGCAACCTTGAAGAAACAGTACAGGAGGCTTGCACTACTACTTCATCCTGATAAAAATAAATTTTATGGGGCGGAAGCTGCTTTCAAGTTGATTGGGGAGGCCAATAGGGTGTTGGGTGATCAAACAAATCGTTCTTTATATGACATGTCTTGTGAAGTCTCTATGAGAACTGCAGCGCCTAAAACTTCATCCCATTACTCAAATGAGAATGTATTTGCTGCAGCACATGATGAAAATGCAACAAATTTTCAGAAAAAATCTTCAAACCCCCCTTTTGCTTCTCAGAATGCATTTCAGCAAGTTGGGCAACAGACATTCTGGACATCTTGTCAACATTGCAATACTAAGTACCAATACTACAAAATTTATGTAAATGCAAGCTTACGTTGTCCAAAGTGTATGAAATGCTTTACAGCTCTTGATTTAGGGAACCAGGGCTTCCCACCAGGACATACACAGAAGTCATTTAATGACCAAAACAAGGCTCCAAAGCATGCTCCACCAAAACCACCCTCAAAAAGTAAGGGAGTAAAGCCCCTTAGTGGAGGACATGCTGATAAGTTTTTTCAGTCACCCCCTGTGTCTATGGGAAAATGTGCTGCTGGAATTGGTGGAGATTGCAAAGATGAAAAGAGTGAAGCTGGACATGCAGCTAGAGGTGGGGCAAATGGTAATGTTCGCAAACCTAAAGCCATGGGGTCACAAACCTCAGCAAATGTTGGAAGTAAAAGAGTAAGACAGTCAGCACCACATTCTGGAGAAAGTTTCAATTCTTCAATTGGTAATGGCATGAAAGATGCTGATGTCCAACAAAATGGTTTTGATCCTTCTAGACTCAATGCAAGGAGATCTTCCAGGCAAAAGAAGAATGTCTCCTATGCAGAGGATGATTTTGAAAATACATCCGAAAATCCACGACAAAATGAATCATTTAACAACAATCAAGTTGAGGAAATGAAAGAACCTGCAAGTGGTGGGATTTCGAATAGCAAAAATCCAGCTAGTTTTGCTACTTCTGTGGGTGATCAAAACAGAGAGTTGAGAAATAAAGTAAGTGGTGCACCTGAAGAAATAAAGTCAGAAGATCATGATATTAGCATGACAAAAGCAGACAAGTGCACTCCATTGATTTCAAATCCCCAGTCTGGTCCAGATATTCAATGTCCTGATGCTGATTTTAGTGATTTTGAGAAGGATAAGGCTGAGAGTTGTTTTACTGTTAATCAATTTTGGGCTGTTTATGATGATGCTGATACAATGCCAAGATTTTATGCTCTCGTCAAGAAAGTGGCTTCCCCTTTCAAGTTGCAGATTACTTGGTTGGAACCTGACCCGGATGACGAAGGCATGATTAGTTGGTTTAATGCAGATTTGCCTGTTGGTTGTGGTAAGTTCAAACTTGGTGGTACTCAGAAAGCTGTAGACCATGCTATGTTCTCTCATCAAATGCATTGTATAAAAGGAAGTGGTAAAGGGTCTTATCTGTTATGTCCTAAGCAGGGTGAAACTTGGGCAATTTTCAGAGATTGGGATATCAAATGGAGTTCTAATCCAGAAAAGCATTTCAAGTATGAATTTGACTATGTTGAAATCGTCTCAGATTTTTCTGAGAATATTGGCATTGAAGTTGCTTATCTCGGTAAAGTGAAAGGATTTGTTAGCCTATTTCAGAAAACTGAGAAGAAAGGAACTATAGGATTTTGTGTTCATCCTAATGAGCTATACAGGTTCTCACATAGAGTACCTTCATATAAGATGACTGGTAATGAAAGGGAAGGTGTTCCCAAAGGATCTTTTGAACTAGATCCTGCTGCCCTGCCTTCTAATCTCTTTGAAGTTGGTGATTCTGGTGATGTGAGGATGGAGAATTGA 2112 0.4006 MDCNKDEATKAKQIAESRMQCGDFVGALKFATKAKNMYADVENISKILTVCEVHSAAQNKLSGSGMDWYGILQAERFSDGATLKKQYRRLALLLHPDKNKFYGAEAAFKLIGEANRVLGDQTNRSLYDMSCEVSMRTAAPKTSSHYSNENVFAAAHDENATNFQKKSSNPPFASQNAFQQVGQQTFWTSCQHCNTKYQYYKIYVNASLRCPKCMKCFTALDLGNQGFPPGHTQKSFNDQNKAPKHAPPKPPSKSKGVKPLSGGHADKFFQSPPVSMGKCAAGIGGDCKDEKSEAGHAARGGANGNVRKPKAMGSQTSANVGSKRVRQSAPHSGESFNSSIGNGMKDADVQQNGFDPSRLNARRSSRQKKNVSYAEDDFENTSENPRQNESFNNNQVEEMKEPASGGISNSKNPASFATSVGDQNRELRNKVSGAPEEIKSEDHDISMTKADKCTPLISNPQSGPDIQCPDADFSDFEKDKAESCFTVNQFWAVYDDADTMPRFYALVKKVASPFKLQITWLEPDPDDEGMISWFNADLPVGCGKFKLGGTQKAVDHAMFSHQMHCIKGSGKGSYLLCPKQGETWAIFRDWDIKWSSNPEKHFKYEFDYVEIVSDFSENIGIEVAYLGKVKGFVSLFQKTEKKGTIGFCVHPNELYRFSHRVPSYKMTGNEREGVPKGSFELDPAALPSNLFEVGDSGDVRMEN 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0607 703 MobiDBLite consensus disorder prediction 368 383 - -
Lal12g0607 703 MobiDBLite consensus disorder prediction 384 426 - -
Lal12g0607 703 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lal12g0607 703 PRINTS DnaJ domain signature 87 102 IPR001623 -
Lal12g0607 703 PRINTS DnaJ domain signature 103 123 IPR001623 -
Lal12g0607 703 Gene3D DnaJ domain 52 155 IPR036869 -
Lal12g0607 703 SMART dnaj_3 66 123 IPR001623 -
Lal12g0607 703 CDD DnaJ 67 120 IPR001623 -
Lal12g0607 703 SUPERFAMILY Chaperone J-domain 63 131 IPR036869 -
Lal12g0607 703 Pfam Domain of unknown function (DUF3444) 466 670 IPR024593 -
Lal12g0607 703 MobiDBLite consensus disorder prediction 290 443 - -
Lal12g0607 703 MobiDBLite consensus disorder prediction 229 271 - -
Lal12g0607 703 Pfam DnaJ domain 67 128 IPR001623 -
Lal12g0607 703 MobiDBLite consensus disorder prediction 309 346 - -
Lal12g0607 703 MobiDBLite consensus disorder prediction 429 443 - -
Lal12g0607 703 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Lal12g0607 703 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 699 - -
Lal12g0607 703 PANTHER - 1 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0607 Lal-Chr12 4383038 4385149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0607 4 222 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.111 2.41e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0607 - - aprc:113873604 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0607 12 4383038 4385149 Lal12g0607 12 4383038 4385149 ECH