Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0606 ATGGATGCTATGCTTCAACTACAAAGGCAACTTTTTGATTATACTTCCTCTCTATTCAATGAGGGGTTTCTAGATGAACAATTTAACCAGCTTCAACAACTTCAAGATGAAAGCAACCCAGATTTTGTGGTTGAAGTGGTAACTCTCTTCTTTGAAGATGCAGAGAGGCTTCTTAATGAGTTGACTAAAGCATTAAGCCAAGAAAGCATTGATTTTAAAAGATTAGATGCTCATGTTCACCAGTTGAAGGGTAGCAGTTCCAGCATTGGCGCACAGAGAATTCACAGAGTCTGCATTTCCTTCAGAAACTCATGTGAGGAGCAAAATGTTGAAGGGTGTCTTAAAAGCTTGCAACAAGTAAAACAGGAGTATTCCACAGTGAAAAGCAAGCTTGAGACTCTCTTCAAGATGGAGAAACAGATTTTGGCTGCAGGGGGATCAGTTTTCTAG 450 0.3978 MDAMLQLQRQLFDYTSSLFNEGFLDEQFNQLQQLQDESNPDFVVEVVTLFFEDAERLLNELTKALSQESIDFKRLDAHVHQLKGSSSSIGAQRIHRVCISFRNSCEEQNVEGCLKSLQQVKQEYSTVKSKLETLFKMEKQILAAGGSVF 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0606 149 PANTHER HISTIDINE PHOSPHOTRANSFER PROTEIN 1 148 - -
Lal12g0606 149 PANTHER - 1 148 IPR045871 GO:0000160|GO:0009927|GO:0043424
Lal12g0606 149 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 4 141 IPR036641 GO:0000160
Lal12g0606 149 Coils Coil 51 71 - -
Lal12g0606 149 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 39 141 IPR008207 GO:0000160
Lal12g0606 149 CDD HPT 45 124 IPR008207 GO:0000160
Lal12g0606 149 Gene3D HPT domain 1 149 IPR036641 GO:0000160
Lal12g0606 149 Pfam Hpt domain 45 128 IPR008207 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0606 Lal-Chr12 4377288 4379356 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0606 K14490 - gmx:100306665 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0606 12 4377288 4379356 Lal12g0606 12 4377288 4379356 ECH
Lal12g0606 12 4377288 4379356 Lal13g0672 13 4354647 4357341 ECH
Lal12g0606 12 4377288 4379356 Lal12g0232 12 1639723 1642455 ECH
Lal12g0606 12 4377288 4379356 Lal13g0672 13 4354647 4357341 LSH