LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal12g0591	ATGGGTTGTGATTCTAAGTTTCTTTCCATGATCTTCATCATCATGATCATGACCCTCTTGATGCTCCTATCATTACAAAGAATCCACATTTTAAATGTGGATCATGCTATGTTTATGGAGATAGAGGTTAAGAATGAGCAAGGAAATGAAAACCAAGTTAAGAAAATTTCAGGACTTGATGAGAATGAAGTGAAAGAAGCATTGATGGTGGAAAAGTTTAGAGCTTTGCTTGGTCTCAATAGTTTTCACACTACAGCACCATCTAATGTTGATTCTTCTCAGTTTCTATCACCTTCTCCATCACCTAACATTGAACCTGAGGCTCCAACTCCATCACCTTTTCCACTTGCACCACATTTTCACCCTCATTCCTATCATCATCCATTACTTAACAACAAAACTCATGAAGATAAAGGCAAAGCTAAGAGAGTGCTAGTAGCTATTGTTGTATCTGTGGGAATTGCTACATTAATTTGTGTTTGTGGGTTAATCTTAGTTTGCAGAAAGTTGAGAAATAATAGAAAGAAACCCAAAAGGACAATGCCATTGTGTAGTAGCAAGAACAAAGGAAGTGGTGGAGGTACTTATCAAAATCAATCAAGCAAGGTGAGTTTAAACTCTGGGGGGTTAGATCTGTTTTATGTTAATGTTTTAGGTGATGATATAGAGCAACAAGGTTGTAGCTTGAAAATAACTTGTGAGAATAAGACAGAATGTTATGATAATGTTAGTAGTTCTTCCACTAAGGAAATTCTACATGTCCATGAATATGTGGAAGAGGAATCAGTGAAAAATGAATATGAATCAGGTGATGAAAGTTTTCATTCCTTTGTTGACTCAGAATCAAATTTAAGGCTTTCTAATGCTTCAGATGGTAGCTTTTGTGACACATTTTCTATGTCCCCTCAAAATTCAAGTTCATTTTTACCAACCCATTTTCCTACTTCTCCTCATAACTCATTTTCAAACACACAATCTCACAAAAATTTCATGCCCCCACCACCACCACCACCACCACCTCTTCAAATGCCACTTTTCAAATTGCATTCTCTAACTACTTCTTCATATAGAGATTCCTCTCACTCTCCACATTCTTCAAGAAATTCAGATACTTTCTCAGCATGCAACCCAAGTCAAGAAAAAGAGTTGATTTCTTCAGCTCAACAACTTAACTCTACAAAATCTGCTTCCACCATTCCACCACCACCATGCCCCCCTCCTTTTTCTAAAGGCAACAACAACAATAGGAAAACACCAACTCCTCCATCATCTCAACTACCTCATTTTACAGCACTTGTTAAAGATGGAGTGCCACTACCAAAACTCAAACCACTTCATTGGGACAAAGTAAGAGCTGCACCAAATCGCACAATGGTATGGGACAAGCTACGATCAAGCTCATTTGAGTTGGATGAGGAAATGATTGAATCACTTTTTGGCTACAATATACAAAATTCAATGAATAATGATGAAACAAAGAGCAAAAGCACATTTCCTAGCAAGCATGTACTTGAGCCAAAACGTTTGCAGAACATTACAATACTCTCAAAAGCACTGAATGCAACATCTGAGCAAATATGCCAAGCCTTAATACAAGGGAAGGGCTTGTGTTTGCAACAACTAGAGGCACTAGTGAAAATGGTACCCACCAAGGAAGAAGAGGGAAAACTGTTCAACTATAAAGGTGACATAAATGAATTGGGTTCCACTGAAAAGTTTGTGAGGGCAATGCTTAGTGTGCCATTTGCATTTCAAAGAGTAGAAGGCATGCTTTACAAAGAGACTTTTGAAGATGAAGTTGTTCACCTCAAGAACTCTTTTTCAATGCTAGAGGAAGCATGCAAGGAACTAAGATCAAGCAGATTATTCTTAAAACTACTAGAAGCAGTTCTGAAAACAGGAAATCGTATGAATGTTGGTACAATAAGAGGAGGTGCTAGAGCATTTAAACTAGATGCTCTTCTCAAACTATCAGATATAAAAGGAACTGATGGAAGAACAACTTTACTTCATTTTGTTGTTCAAGAAATTGTTCGTGCTGAAGGAATAAGAGTCTCAGATAGCATCATGGGCAAAATCTGTCAGAAAAGTAGTAAAGTTAACAAAACAGAAGAAGAGAAAGAAGAAGGTTATAGAAGAATGGGACTAGAATTAGTTTCTGGTCTTAGCACTGAGTTATACAATGTGAAGAAAACAGCTACTATTGACTTGGATGTTCTTGCTAGCTCAGTGTCAAATTTAAGAGATGGAATGAGTAAGTTGCAATATCTTGTGGAGAAGGATTTGTGTAATGGTGAGGAGAGTGAGAACTTTGTTAACTCAATTAAGTGTTTCCTAAGTTATGCAGATAGAAACTTGAGGGAGTTGCAAGGAGATGAAGATAGAGTGATAGTAAGAGTGAAAGAGATTACTGAATATTTTCATGGGGATGTGAGCAAAGAAGATAATCCACTAAGGATCTTTGTGATAGTGAGAGATTTTTTGGGTATGTTAGATAATGTTTGTAAAGAGCTTAGAAGGTTTAAAGCTTCACATACCCCAAACCCTATTGCAACATTCAGATAG	2565	0.3708	MGCDSKFLSMIFIIMIMTLLMLLSLQRIHILNVDHAMFMEIEVKNEQGNENQVKKISGLDENEVKEALMVEKFRALLGLNSFHTTAPSNVDSSQFLSPSPSPNIEPEAPTPSPFPLAPHFHPHSYHHPLLNNKTHEDKGKAKRVLVAIVVSVGIATLICVCGLILVCRKLRNNRKKPKRTMPLCSSKNKGSGGGTYQNQSSKVSLNSGGLDLFYVNVLGDDIEQQGCSLKITCENKTECYDNVSSSSTKEILHVHEYVEEESVKNEYESGDESFHSFVDSESNLRLSNASDGSFCDTFSMSPQNSSSFLPTHFPTSPHNSFSNTQSHKNFMPPPPPPPPPLQMPLFKLHSLTTSSYRDSSHSPHSSRNSDTFSACNPSQEKELISSAQQLNSTKSASTIPPPPCPPPFSKGNNNNRKTPTPPSSQLPHFTALVKDGVPLPKLKPLHWDKVRAAPNRTMVWDKLRSSSFELDEEMIESLFGYNIQNSMNNDETKSKSTFPSKHVLEPKRLQNITILSKALNATSEQICQALIQGKGLCLQQLEALVKMVPTKEEEGKLFNYKGDINELGSTEKFVRAMLSVPFAFQRVEGMLYKETFEDEVVHLKNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLSDIKGTDGRTTLLHFVVQEIVRAEGIRVSDSIMGKICQKSSKVNKTEEEKEEGYRRMGLELVSGLSTELYNVKKTATIDLDVLASSVSNLRDGMSKLQYLVEKDLCNGEESENFVNSIKCFLSYADRNLRELQGDEDRVIVRVKEITEYFHGDVSKEDNPLRIFVIVRDFLGMLDNVCKELRRFKASHTPNPIATFR	854

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal12g0591	854	MobiDBLite	consensus disorder prediction	184	199	-	-
	Lal12g0591	854	MobiDBLite	consensus disorder prediction	177	199	-	-
	Lal12g0591	854	Gene3D	Formin, FH2 domain	454	847	IPR042201	-
	Lal12g0591	854	MobiDBLite	consensus disorder prediction	309	428	-	-
	Lal12g0591	854	PANTHER	FORMIN-LIKE PROTEIN	14	854	-	-
	Lal12g0591	854	SUPERFAMILY	Formin homology 2 domain (FH2 domain)	400	842	-	-
	Lal12g0591	854	ProSiteProfiles	Formin homology-2 (FH2) domain profile.	432	854	IPR015425	-
	Lal12g0591	854	MobiDBLite	consensus disorder prediction	90	118	-	-
	Lal12g0591	854	Pfam	Formin Homology 2 Domain	438	831	IPR015425	-
	Lal12g0591	854	SMART	it6_source	434	846	IPR015425	-
	Lal12g0591	854	MobiDBLite	consensus disorder prediction	329	344	-	-
	Lal12g0591	854	MobiDBLite	consensus disorder prediction	102	118	-	-
	Lal12g0591	854	MobiDBLite	consensus disorder prediction	410	427	-	-
	Lal12g0591	854	PANTHER	FORMIN-RELATED	14	854	IPR027643	GO:0003779\|GO:0030036\|GO:0045010\|GO:0051015
	Lal12g0591	854	MobiDBLite	consensus disorder prediction	309	328	-	-
	Lal12g0591	854	MobiDBLite	consensus disorder prediction	347	397	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal12g0591	Lal-Chr12	4258811	4263491	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal12g0591	417	854	FH2 protein (formin) Gene Family	AT3G05470	72.273	0.0	643

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal12g0591	-		-	gmx:100793761	1056.2