Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0589 ATGTCAAACATCACAAGTTGTGATAGTGTGAGCTTCTCCACTGAGAATACAAGAGAAGATGCAGTTAAGCAGCAATTAGAGATACTTGGCCAGTTCAATAGTCCTCATTCTACATCTCATACTTCAACAACAACAACAACAAATAATAATAATTATTATAGCAATGTCTCCAACTCTAATTCACAACCACCTTCTTCTGCTAAGAGGAAAAGAAGCCTGCCAGGAAATCCAGACCCAAGTGCTGAAGTGATAGCTCTATCACCAAATGCATTGATGGCCACAAACAGGTTCCTATGTGAAATATGCAACAAAGGGTTTCAAAGAGATCAAAACCTTCAATTGCACCGTCGAGGGCATAACTTGCCATGGAAACTTAAACAGAGAACAAGCACAGAAATTAGAAAGAGAGTTTATGTTTGTCCTGAACCCTCATGTGTACACCACAACCCAGCAAGAGCACTAGGTGATCTTACTGGGATTAAAAAGCACTTTTGCAGAAAGCATGGTGAGAAGAAGTGGAAATGTGATAAGTGCTCCAAGAAATACGCTGTTCAATCTGACTGGAAAGCCCATTCCAAAATCTGTGGTACTAGGGAGTACAAATGTGACTGTGGCACCCTCTTTTCCAGAAGAGATAGCTTCATTACCCACAGAGCTTTCTGTGATGCACTGGCAGAGGAGAACAACAAAGGCAATGAAGAACAATTGTCAAAGATGGGTGCAAATTTGCAATGCCAACCAATCCCAAACCTGGTTCCATCATTACCAATCAACACCGACATTATTCCCATCTCACAAATTGGAGGGACAGCATCAGAATTTAACAACAAGAATAATCCATTATCATCACTGCAAATTCCTGCAAGTTCAAAACCCTTCAACATGACAATAAGAAACTCTTCTCCCTCTCTTCAACTGAGTTCAAACATTTTAGCTTCTCATGAAAGCTCGTCACTCATGTCTGCCACTGCATTACTTCAAAAAGCTGCTCAAATGGGTGCAACCGTGAGTAATAATAATAGCAATAATGTTTCTACAACCATGGCACCACCATCATTTGGTTTGGTGCAATTACAACAACCACCGCCAAATAATGTTTATTCCTTCATGAACCACTACATACAACAACAAGAACATGATCATATTTCGTCTCATTATAATAGTTTCAATGCACATCATGAGATGAATACTGGTGGTGACGCAGGAGGTAGTGTTGTGGGAATGAATAGTGCGGATATGTTTAATGTTATATTCGATCAAAGTAAGGCGTTATGTAAGATCATAGATCAGAATAATAGAAGCATTAACAATGTGGTTTTGCATCAAACAAATGGAGGGTCAAGTGGTGGTGCTATTAACATTGGTGCTGAAACTAAAGGAAGTGGTGATGTAATGACTCTGGACTTGTTGGGTATAGGAGGTAGTGACGGTGGCAATGGTGAAAATGTGCATGGGAATTTGAATATCTATGGTGGTGGTGCCCAACAAGGTGAAACTGCTGCAGCAGATGATTTTTGGAGAAATTGGTCAACCAAGAATGGAGGCTTTGGATCATTTTCAGCATCTAGCAGCATGTGA 1578 0.4018 MSNITSCDSVSFSTENTREDAVKQQLEILGQFNSPHSTSHTSTTTTTNNNNYYSNVSNSNSQPPSSAKRKRSLPGNPDPSAEVIALSPNALMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSTEIRKRVYVCPEPSCVHHNPARALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDWKAHSKICGTREYKCDCGTLFSRRDSFITHRAFCDALAEENNKGNEEQLSKMGANLQCQPIPNLVPSLPINTDIIPISQIGGTASEFNNKNNPLSSLQIPASSKPFNMTIRNSSPSLQLSSNILASHESSSLMSATALLQKAAQMGATVSNNNSNNVSTTMAPPSFGLVQLQQPPPNNVYSFMNHYIQQQEHDHISSHYNSFNAHHEMNTGGDAGGSVVGMNSADMFNVIFDQSKALCKIIDQNNRSINNVVLHQTNGGSSGGAINIGAETKGSGDVMTLDLLGIGGSDGGNGENVHGNLNIYGGGAQQGETAAADDFWRNWSTKNGGFGSFSASSSM 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0589 525 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 36 475 - -
Lal12g0589 525 MobiDBLite consensus disorder prediction 32 69 - -
Lal12g0589 525 SUPERFAMILY beta-beta-alpha zinc fingers 96 193 IPR036236 -
Lal12g0589 525 MobiDBLite consensus disorder prediction 32 81 - -
Lal12g0589 525 Gene3D Classic Zinc Finger 94 194 - -
Lal12g0589 525 ProSitePatterns Zinc finger C2H2 type domain signature. 99 119 IPR013087 -
Lal12g0589 525 ProSiteProfiles Zinc finger C2H2 type domain profile. 97 119 IPR013087 -
Lal12g0589 525 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 36 475 - -
Lal12g0589 525 SMART c2h2final6 97 119 IPR013087 -
Lal12g0589 525 SMART c2h2final6 138 168 IPR013087 -
Lal12g0589 525 SMART c2h2final6 173 193 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0589 Lal-Chr12 4245767 4251044 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0589 42 337 IDZ Gene Family AT3G50700 56.380 5.88e-116 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal12g0589 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0589 - - lang:109354363 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0589 12 4245767 4251044 Lal12g0589 12 4245767 4251044 ECH