Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0583 ATGAAGCAACCACTTGTTCCTTTGGCAACTTTGATTGGCCGCGACGTACGGAATTTAAAAATCGAAAAGCCTATTGTGAAGTATGGGCAAGCTGGTTTGGCAAGGAAAGGAGAAGATTACTTTCTAATCAAGACAGATTGCCAGAGGATTCCTGGGGATTCATCAACATTATTTTCTGTCTTCGCGATCCTTGATGGGCATAATGGTATGTCTGCTGCTGTTTTTGTGAAGGAGAACATACTCCGCAATGTGATGAGTGCAATACCACAAGATATCAGCAGAGATGAGTGGCTTCAAGCTCTGCCTCGGGCTCTAGTTGTGGGTTTTGTGAAAACTGATATAGAGTTTCAGAAAAAAGATACACAGGGAGGTGTTGTTTCTCTCTTGACGGTTGATCACAGATTGGATGAAAATGTAGAAGAGAGGGAGCGCGTTACTGCCAGTGGTGGAGAAGCTTTGCTTAAACCTCACATGTTTTGGTTCCTTAATACGTCTAAGGGCCTCTTCGCTGCTGGCCTGCTTTCAAATGCTGGTGGAAGGCTTATAATAGCATCTGATGGTATTTGGGATGCTTTATCTTCTGATGTGGCTGCCAAATCATGTCGAGGCCTACCTGCTGAGCTTGCTGCAAAGCTAGTGGCTAAGGAAGCTCTAAGGTCAAGAGGGCTGAAAGATGATACAACTTGCCTTGTTGTAGATATAATTCCTTCAGACTATCCCGTGATACCAACAATTCCAAGAAAGAAGTACAATATGCTAATTTCCCTTCTATTCAGAAAGAAATCTCAAAACTCTTCAAACAAGGCTTCTAATAAGCTTTCCGCAGTTGGTGTTGTGGAGGAGTTATTTGAAGGGGGTTCGGCGGTGCTTACGGAGAGGCTGGGTAAGGAGTCTCCATTTAACATGAATTCTGGGATTTTCCGTTGCGCGGTTTGTCAAGTGAATCAACCTCCTGGCGATGGTTTAGCAGTGAACTGTGGACCGTTTTTCCCTTCGGCATCAAAGTCACGGGAAGGTCCATTTCTCTGCACAAACTGTCGGAAGAAGAAAGACGCCATGGAAGGAAAAAGGCCTAGCATTCCCATTGTGGACAGCACAGCATAG 1104 0.4475 MKQPLVPLATLIGRDVRNLKIEKPIVKYGQAGLARKGEDYFLIKTDCQRIPGDSSTLFSVFAILDGHNGMSAAVFVKENILRNVMSAIPQDISRDEWLQALPRALVVGFVKTDIEFQKKDTQGGVVSLLTVDHRLDENVEERERVTASGGEALLKPHMFWFLNTSKGLFAAGLLSNAGGRLIIASDGIWDALSSDVAAKSCRGLPAELAAKLVAKEALRSRGLKDDTTCLVVDIIPSDYPVIPTIPRKKYNMLISLLFRKKSQNSSNKASNKLSAVGVVEELFEGGSAVLTERLGKESPFNMNSGIFRCAVCQVNQPPGDGLAVNCGPFFPSASKSREGPFLCTNCRKKKDAMEGKRPSIPIVDSTA 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0583 367 ProSiteProfiles PPM-type phosphatase domain profile. 24 234 IPR001932 -
Lal12g0583 367 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 120 151 - -
Lal12g0583 367 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 1 119 - -
Lal12g0583 367 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 174 363 - -
Lal12g0583 367 PANTHER ALPHABET, ISOFORM E-RELATED 1 119 - -
Lal12g0583 367 PANTHER ALPHABET, ISOFORM E-RELATED 120 151 - -
Lal12g0583 367 PANTHER ALPHABET, ISOFORM E-RELATED 174 363 - -
Lal12g0583 367 SUPERFAMILY PP2C-like 30 234 IPR036457 -
Lal12g0583 367 CDD PP2Cc 32 234 IPR001932 -
Lal12g0583 367 Gene3D - 27 122 IPR036457 -
Lal12g0583 367 Gene3D - 123 237 IPR036457 -
Lal12g0583 367 SMART PP2C_4 15 232 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0583 Lal-Chr12 4166148 4169629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0583 2 359 PP2C-type Phosphatase Gene Family AT1G09160 59.080 2.95e-159 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0583 - - gmx:100794630 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0583 12 4166148 4169629 Lal12g0583 12 4166148 4169629 ECH
Lal12g0583 12 4166148 4169629 Lal13g0629 13 4086189 4089792 LSH
Lal18g0370 18 3160917 3164253 Lal12g0583 12 4166148 4169629 PCT
Lal12g0583 12 4166148 4169629 Lal18g0370 18 3160917 3164253 PCT