Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0549 ATGGGTAATGGTACTTCTCGTGTTGTTGGCTGTTTGGTTCCATTCAATGGCAAAGGTGGTGATGATTTGGAGTTTTTAGAGCCATTAGATGAAGGGTTAGGCCATTCCTTCTGTTATGTGAGGCCATCCATTTTTGAATCTCCTGCCATTACCCCGTCGAATTCTGAGAGGTATACACTTGATTCAAGTATCCTTGATTCCGAAACGTTGAGTGGATCCTTTAGGCATGATAGCATGGAAGATTCTTCCGGCATACACAAGCCGGGCAAGAATTGTCCAGAAACCACATTTAAGACAATTTCTGGGGCTTCTGTCAGTGCCAATGTTTCAACTGCAAGAACCGGCAACCAGAATGCATTGTTTGCCAGTGATGCCCTGGAACCTGCTGCGTCGTTTGAGGGAACTGCCTCGTTTGCTGCAATCCCTTTGCAGCCTGTTCCCCGTGGTTCTGGACCTTTAAATGGTTTCATGTCTGGACCCCTGGAGAGAGGTTTTGCCTCAGGTCCATTGGATAGGGGTGGTGGCTTCATGTCTGGGCCATTAGAGAAGGGAGTTATGTCAGGTCCTCTTGATGATAATCATAAATCCAACTTTTCAGCGCCTCTTGCACGTGGTCGTCGGAGGCCTCGCTTCCAGCATCTCATTAGAAGTGTAAGCGGACCAATGAAGAACACTTTTTCTCGGACCTTCTCTAAGCATTCTGCAGGTGGCGGTTGGATGCAGCGGTTATTGTTTCACCCAGTAACCCAACTAGCTTGGCATTCCAAAGAGGCAAAGTTTCGATCAGAAGTTGCTAGAAACTGTGTTGAAGTTGGGTCATCTGAGGTGGAGTATAGAAATACACATAATTTGCAGTGGGCTCAGGGCAAGGCTGGTGAAGATAGGGTTCATGTAGTGCTTTCTGAAGAACAAGGGTGGTTGTTTATTGGGATATATGATGGTTTTAGTGGACCAGATGCACCTGATTTTCTGATGAGTCATCTTTACAGATTTATAGACAAGGAATTGGAAGGGTTACTTTGGGATTATGAAGATAATCTTGTAGATCCACATCCATGTGAACCTGAAGTCTCTAAAAGTGTAAAACCTATGTCCGCTCAAGTAAGCAATAGGGAGGAACTGTCTGATACTCATACTCATACTAATTCAAACCAAGGAATTTTAGAATCTTCTTCTAGTTCAGTAACAATCAAGGATCAATCATCTAACAGTGAGATAGTTGAGGAAAATGCTGAAATCCGGTTACCTAACTGTGGAAGTTCTAGTATCTCGTGTACCATTCCAACTTCTGTTCCACCACTTGGACAATTGCCTAGTAAAGGTAGAAAAAGTGTGCGTCTTTATGAGCTACTTCAGATGGAGTCATGGGATGAGCAGGGTCTTTTTTCGGTCTCAGAACAAGGTAAGGATTCTTCTGTTCCTAGGGAATCAACACTAGAGGGGAATATGAGACCAAGCTCATCTAATTTAAACGAAGAAAGTTCCAGAGATCAGGACGAAGATCCCACTACATCAGGGAAAAATGGAGGCATTAGGTTTGGAGCATCTAACCAGGAGCCTGTGGGTGCCTTTTCTGTTTCAGGACAACGGCAGAATTCAAGGAAGTCATTTATCAGTTCAAAAATCAGAAAAATGTACAGGAAGCCAAAGGCCTTGTGTAAGAAACTTTTTCCTTGGAGTTATGATTGGGATAGGGACGAAACTTTTGTTGATGAGAAACTAGTCGAAGCCTCAGGTCCGATTAGAAAATGCAAGTCTGGGGTCGATCATAATGCAGTTTTAAGAGCAATGGAACGAGCCCTTGGGAGAACAGAAGAGGCATACATGGAAATGGTAGAGAGTAATCTGGACAGGAATCCAGAGCTTGCTTTAATGGGGTCTTGTGTTTTAGTGATGCTGATGAAGGATCAAGATGTTTATGTCATGAACCTTGGAGATAGTTGTGTGATTTTGGCTCAAGAAAGACCGAATGATCGTTATCCTAATCCAAGTTTTGTCAAGGATGACGCAAGGCATAAAAATCGATCTAGAGAGTCATTAGTACGCATGGAGCTGGATCGGATTTCGGAGGAGTCCCCAATTCACAATCAAAACAGTCATGTTAATAAGATGAACAAAAACAGAGAGATATCCATGTGCAGATTGAAAATGAGGGCTGTTCAGCTTTCCACAGATCATAGCACAAATACTGAAGAGGAAGTTTATAGAATAAAAGCAGAACATCCTGATGATAATCAAGCCATATTAAATGATCGAGTGAAAGGACAATTAAAAGTCAGCCGAGCATTTGGTGCCGGGTTCTTGAAGAGGCTGTCTTTTAACGAAGCCCTGCTGGAGATGTTTCAAGTTGATTATGTGGGAACTGCTCCTTACCTAAGTTGCACGCCTTCCCTTCTGCATCACCGACTTTCCTCAAGCGATCGGTTCTTGGTACTCTCCTCTGATGGGCTTTACCAATATTTCAGCAATGAAGAGGTAGTTGCCCATGTCACATGGTTCATGGAAAATGCCCCCGAAGGTGACCCTGCACAGTACCTTATTGCAGAGCTTCTCCTCCGTGCTGCTAAAAAGAATGGAATGGATTTTCATGAATTGCTTGATATTCCTCATGGAGAGAGACGTAAATATCATGATGATGTATCTGTTATGGTGGTTTCTTTGGAGGGGAGAATTTGGAGATCATCAGGATAA 2691 0.4333 MGNGTSRVVGCLVPFNGKGGDDLEFLEPLDEGLGHSFCYVRPSIFESPAITPSNSERYTLDSSILDSETLSGSFRHDSMEDSSGIHKPGKNCPETTFKTISGASVSANVSTARTGNQNALFASDALEPAASFEGTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDRGGGFMSGPLEKGVMSGPLDDNHKSNFSAPLARGRRRPRFQHLIRSVSGPMKNTFSRTFSKHSAGGGWMQRLLFHPVTQLAWHSKEAKFRSEVARNCVEVGSSEVEYRNTHNLQWAQGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSHLYRFIDKELEGLLWDYEDNLVDPHPCEPEVSKSVKPMSAQVSNREELSDTHTHTNSNQGILESSSSSVTIKDQSSNSEIVEENAEIRLPNCGSSSISCTIPTSVPPLGQLPSKGRKSVRLYELLQMESWDEQGLFSVSEQGKDSSVPRESTLEGNMRPSSSNLNEESSRDQDEDPTTSGKNGGIRFGASNQEPVGAFSVSGQRQNSRKSFISSKIRKMYRKPKALCKKLFPWSYDWDRDETFVDEKLVEASGPIRKCKSGVDHNAVLRAMERALGRTEEAYMEMVESNLDRNPELALMGSCVLVMLMKDQDVYVMNLGDSCVILAQERPNDRYPNPSFVKDDARHKNRSRESLVRMELDRISEESPIHNQNSHVNKMNKNREISMCRLKMRAVQLSTDHSTNTEEEVYRIKAEHPDDNQAILNDRVKGQLKVSRAFGAGFLKRLSFNEALLEMFQVDYVGTAPYLSCTPSLLHHRLSSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENAPEGDPAQYLIAELLLRAAKKNGMDFHELLDIPHGERRKYHDDVSVMVVSLEGRIWRSSG 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0549 896 Pfam Protein phosphatase 2C 712 859 IPR001932 -
Lal12g0549 896 ProSiteProfiles PPM-type phosphatase domain profile. 277 887 IPR001932 -
Lal12g0549 896 MobiDBLite consensus disorder prediction 379 403 - -
Lal12g0549 896 SUPERFAMILY PP2C-like 289 888 IPR036457 -
Lal12g0549 896 MobiDBLite consensus disorder prediction 73 92 - -
Lal12g0549 896 Gene3D - 477 893 IPR036457 -
Lal12g0549 896 Gene3D - 253 427 IPR036457 -
Lal12g0549 896 SMART PP2C_4 277 885 IPR001932 -
Lal12g0549 896 MobiDBLite consensus disorder prediction 462 518 - -
Lal12g0549 896 CDD PP2Cc 593 887 IPR001932 -
Lal12g0549 896 PANTHER PROTEIN PHOSPHATASE 2C 11 896 IPR015655 GO:0004722|GO:0006470
Lal12g0549 896 MobiDBLite consensus disorder prediction 354 403 - -
Lal12g0549 896 MobiDBLite consensus disorder prediction 462 492 - -
Lal12g0549 896 PANTHER PROTEIN PHOSPHATASE 2C 32 11 896 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0549 Lal-Chr12 3935378 3945554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0549 1 896 PP2C-type Phosphatase Gene Family AT2G46920 63.415 0.0 1099
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0549 12 3935378 3945554 Lal12g0549 12 3935378 3945554 ECH