Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal12g0542 | ATGGATGATTGTTGCGCTGTTTGTGCTGAACCTTTGGAATGGGTTTCGTACGGACCCTGTTTCCATCGCGACGTTTGCTCCACCTGCGTTTCTCGCCTCCGTTTCATTTGCGACGATCGCCGTTGCTGCATTTGCAAGACTCCTTCCGACGTCGTTTTCGTCACCAAGGCTCTAGGAGATTATACAAGGATGATTAGTGACTTCTCATCCCTGCCGTCTGACGTAAGGGAAGGTCAGGTTGGATCATATTGGTACCATGAGGATACAAATGCATTTTTTGATGATGTGGACCATTACAAGATGATCAAGGCTATGTGCAGGCTCTCGTGCAGTGTATGCGACAAGTTGGAGGACCAACCACACGATCCCTCAAAACGTAGAGGGATGATGTTTAGGAATATAGAGCAGCTGAAGGGTCACTTATTCCACCGCCATAGATTGCTTATGTGCAGTTTGTGTTTGGAGGGAAGGAAGATCCACTTCCGTCAAGACCATTTCTTATGTGAAGATGAGGCTTGCCTTGCTAAAAAGTTTATTGTCTTTCAATCTGAACAAGAAATGAAGAGGCATAATGCTGTTGAACATGGAGGGCGTATGTCACGGTCACAGCGTAATGCTGCTCTTCAGGCATCCGTCTTTATTTTCTCACAGATACCAACTAGCTTTCGTTACAGACATGGTAATGAACAGGACCGACGCCATGGAAGAGGTCGTACTTTTCACCGTGATGTTTCTGAAAGTCAACTGTCTATGGCCATTGAAGCCAGTTTGGAGGCATCAAATGCAGGGCACATGTTTCATGATCCACCGACATCAGATACTGGACAAGTTGATGTTCATAATGGGAATGCTAATATTGATTCTGTTCAGCCACTGGAATCATCAGCATCATCAAGATATCTACAAGTGTTGGGGCAGAACTCTTCGGGCGCACCTTTGGAAAATTCTTCCTTTCCTCCACTCCCCAAAGCTTCCAGAAAAGGCAAGCAGAAGTCCAAACATGGGTCGGAAGGTTCTTCTAGTAACTCCATGGCTGCACATCTGCGCCGACATAGGAATGTATCTGTTATTAATTCTGCTAATGCTTGGCCAGCAGCAAGTCGTGGACCTACACAACCTTTAAGTAATCCTACACTATCTAGACTGTCAACAAATACTGCTCCTGGAGTGTCACGTAATTCTGGTCCTGTGAGGACAGTCATTAACAGTGCACCTGCACCATCGACTTATGCTAGTTCTGTTCAGCCTATGCAGAGAACTGCTCGAGAGACACGTGATAATTGTGGAATTGTCCACTCAGCTTCTGCTCCAAATATCACTCAGGGCAGTCCCGTGGCACCTTCAATTTCTGATTTTCCTCCAGTATCTGCTGCACAAGTGAGAACATTAGCGGCAAGCAGCCGTTCTTTATTGAATGCAAAGGATGTTCGCCAGAGCAGTCTCGTGGCACCTTCAATTTCTGATTTTCCTCCTGTATCTGCTTCACAAGTGAGGAATTTAGCCACAAGCAGCCGATCTTCGTTGAATGCAGAGGATGTTCATGCTGCTAACAAGTTGTTGATTGAAAAGATTCGCAGCACTCTTGATTTTGATGAAGATAGATACGCATTATTTAAAGATTTTTCTGCACAATATCGCCAAGGAATAATAGACACACCTACATATCTACACTATGTGCAGCAGTTTGGCTTGTCTCATCTTGTACATGAGTTGGCCCGGCTCTGCCCAGATGTTCAGAAGCAGAAAGAGCTTGTTGAGTGTTACAATGCTAGTTTGCAAAAAAACATTATACTAGAAAATGGTTCAAGTCATACTAGCACCCATCGTAAAAATGGTAATATCTCCCAGAAAAGTAAGGGTAAGTCTGTTGATGCTGGTGTTAGTAATCCCAAAGAGAGATTAGCAGATAGTTTTTTGAACACTGTACGTCAACTGCAACTGAACAATAACCTTTCGGAAGCGAAGGTGGAGGTGCTATCAAGGGGTGATTACCGTACTGACAAAGGCAAGTCAAAAATCGAGAGTTCTGGGGGTCAATCCATGGTGAAACTTGGTGGGCAGAGTGAGACATTAAGTGGCAGTATATCAAATCAAATTAGTGAGGATAAGGGTGGTAAAAACAAGCAACGCAAGAAAACTTCTAAGTTCCTTAGATCCCGCCTTGGTGATGCTTCTGCTGAATCAACTTTAGATATTGAAAATTCACAGACTGATTCAGATCCGAAAACTACAAATGGCTTAAACAGTAACAAGAATGGCACTGGAAGTATGCCTGCACGAGGTGTTTGGAGAAACAGTGGAGGCAAAAAACTCTTTTCCTAA | 2322 | 0.441 | MDDCCAVCAEPLEWVSYGPCFHRDVCSTCVSRLRFICDDRRCCICKTPSDVVFVTKALGDYTRMISDFSSLPSDVREGQVGSYWYHEDTNAFFDDVDHYKMIKAMCRLSCSVCDKLEDQPHDPSKRRGMMFRNIEQLKGHLFHRHRLLMCSLCLEGRKIHFRQDHFLCEDEACLAKKFIVFQSEQEMKRHNAVEHGGRMSRSQRNAALQASVFIFSQIPTSFRYRHGNEQDRRHGRGRTFHRDVSESQLSMAIEASLEASNAGHMFHDPPTSDTGQVDVHNGNANIDSVQPLESSASSRYLQVLGQNSSGAPLENSSFPPLPKASRKGKQKSKHGSEGSSSNSMAAHLRRHRNVSVINSANAWPAASRGPTQPLSNPTLSRLSTNTAPGVSRNSGPVRTVINSAPAPSTYASSVQPMQRTARETRDNCGIVHSASAPNITQGSPVAPSISDFPPVSAAQVRTLAASSRSLLNAKDVRQSSLVAPSISDFPPVSASQVRNLATSSRSSLNAEDVHAANKLLIEKIRSTLDFDEDRYALFKDFSAQYRQGIIDTPTYLHYVQQFGLSHLVHELARLCPDVQKQKELVECYNASLQKNIILENGSSHTSTHRKNGNISQKSKGKSVDAGVSNPKERLADSFLNTVRQLQLNNNLSEAKVEVLSRGDYRTDKGKSKIESSGGQSMVKLGGQSETLSGSISNQISEDKGGKNKQRKKTSKFLRSRLGDASAESTLDIENSQTDSDPKTTNGLNSNKNGTGSMPARGVWRNSGGKKLFS | 773 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal12g0542 | 773 | MobiDBLite | consensus disorder prediction | 274 | 293 | - | - | |
Lal12g0542 | 773 | MobiDBLite | consensus disorder prediction | 665 | 773 | - | - | |
Lal12g0542 | 773 | MobiDBLite | consensus disorder prediction | 403 | 422 | - | - | |
Lal12g0542 | 773 | ProSiteProfiles | Zinc finger RING-type profile. | 5 | 46 | IPR001841 | - | |
Lal12g0542 | 773 | CDD | RING-HC_ZNF598 | 5 | 46 | IPR041888 | - | |
Lal12g0542 | 773 | PANTHER | ZINC FINGER PROTEIN 598 | 1 | 159 | IPR044288 | GO:0061630|GO:0072344 | |
Lal12g0542 | 773 | PANTHER | ZINC FINGER PROTEIN 598 | 478 | 772 | IPR044288 | GO:0061630|GO:0072344 | |
Lal12g0542 | 773 | PANTHER | ZINC FINGER PROTEIN 598 | 159 | 479 | IPR044288 | GO:0061630|GO:0072344 | |
Lal12g0542 | 773 | MobiDBLite | consensus disorder prediction | 728 | 756 | - | - | |
Lal12g0542 | 773 | MobiDBLite | consensus disorder prediction | 262 | 293 | - | - | |
Lal12g0542 | 773 | MobiDBLite | consensus disorder prediction | 673 | 702 | - | - | |
Lal12g0542 | 773 | MobiDBLite | consensus disorder prediction | 599 | 629 | - | - | |
Lal12g0542 | 773 | MobiDBLite | consensus disorder prediction | 307 | 345 | - | - | |
Lal12g0542 | 773 | PANTHER | EBR1 | 1 | 159 | - | - | |
Lal12g0542 | 773 | PANTHER | EBR1 | 478 | 772 | - | - | |
Lal12g0542 | 773 | PANTHER | EBR1 | 159 | 479 | - | - | |
Lal12g0542 | 773 | MobiDBLite | consensus disorder prediction | 361 | 397 | - | - | |
Lal12g0542 | 773 | MobiDBLite | consensus disorder prediction | 599 | 623 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal12g0542 | Lal-Chr12 | 3875560 | 3879373 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal12g0542 | 1 | 772 | C2H2 Transcription Factor Family | AT2G47090 | 37.215 | 2.62e-129 | 400 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal12g0542 | K22381 | - | gmx:100799878 | 660.218 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal12g0542 | 12 | 3875560 | 3879373 | Lal12g0542 | 12 | 3875560 | 3879373 | ECH |