Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0542 ATGGATGATTGTTGCGCTGTTTGTGCTGAACCTTTGGAATGGGTTTCGTACGGACCCTGTTTCCATCGCGACGTTTGCTCCACCTGCGTTTCTCGCCTCCGTTTCATTTGCGACGATCGCCGTTGCTGCATTTGCAAGACTCCTTCCGACGTCGTTTTCGTCACCAAGGCTCTAGGAGATTATACAAGGATGATTAGTGACTTCTCATCCCTGCCGTCTGACGTAAGGGAAGGTCAGGTTGGATCATATTGGTACCATGAGGATACAAATGCATTTTTTGATGATGTGGACCATTACAAGATGATCAAGGCTATGTGCAGGCTCTCGTGCAGTGTATGCGACAAGTTGGAGGACCAACCACACGATCCCTCAAAACGTAGAGGGATGATGTTTAGGAATATAGAGCAGCTGAAGGGTCACTTATTCCACCGCCATAGATTGCTTATGTGCAGTTTGTGTTTGGAGGGAAGGAAGATCCACTTCCGTCAAGACCATTTCTTATGTGAAGATGAGGCTTGCCTTGCTAAAAAGTTTATTGTCTTTCAATCTGAACAAGAAATGAAGAGGCATAATGCTGTTGAACATGGAGGGCGTATGTCACGGTCACAGCGTAATGCTGCTCTTCAGGCATCCGTCTTTATTTTCTCACAGATACCAACTAGCTTTCGTTACAGACATGGTAATGAACAGGACCGACGCCATGGAAGAGGTCGTACTTTTCACCGTGATGTTTCTGAAAGTCAACTGTCTATGGCCATTGAAGCCAGTTTGGAGGCATCAAATGCAGGGCACATGTTTCATGATCCACCGACATCAGATACTGGACAAGTTGATGTTCATAATGGGAATGCTAATATTGATTCTGTTCAGCCACTGGAATCATCAGCATCATCAAGATATCTACAAGTGTTGGGGCAGAACTCTTCGGGCGCACCTTTGGAAAATTCTTCCTTTCCTCCACTCCCCAAAGCTTCCAGAAAAGGCAAGCAGAAGTCCAAACATGGGTCGGAAGGTTCTTCTAGTAACTCCATGGCTGCACATCTGCGCCGACATAGGAATGTATCTGTTATTAATTCTGCTAATGCTTGGCCAGCAGCAAGTCGTGGACCTACACAACCTTTAAGTAATCCTACACTATCTAGACTGTCAACAAATACTGCTCCTGGAGTGTCACGTAATTCTGGTCCTGTGAGGACAGTCATTAACAGTGCACCTGCACCATCGACTTATGCTAGTTCTGTTCAGCCTATGCAGAGAACTGCTCGAGAGACACGTGATAATTGTGGAATTGTCCACTCAGCTTCTGCTCCAAATATCACTCAGGGCAGTCCCGTGGCACCTTCAATTTCTGATTTTCCTCCAGTATCTGCTGCACAAGTGAGAACATTAGCGGCAAGCAGCCGTTCTTTATTGAATGCAAAGGATGTTCGCCAGAGCAGTCTCGTGGCACCTTCAATTTCTGATTTTCCTCCTGTATCTGCTTCACAAGTGAGGAATTTAGCCACAAGCAGCCGATCTTCGTTGAATGCAGAGGATGTTCATGCTGCTAACAAGTTGTTGATTGAAAAGATTCGCAGCACTCTTGATTTTGATGAAGATAGATACGCATTATTTAAAGATTTTTCTGCACAATATCGCCAAGGAATAATAGACACACCTACATATCTACACTATGTGCAGCAGTTTGGCTTGTCTCATCTTGTACATGAGTTGGCCCGGCTCTGCCCAGATGTTCAGAAGCAGAAAGAGCTTGTTGAGTGTTACAATGCTAGTTTGCAAAAAAACATTATACTAGAAAATGGTTCAAGTCATACTAGCACCCATCGTAAAAATGGTAATATCTCCCAGAAAAGTAAGGGTAAGTCTGTTGATGCTGGTGTTAGTAATCCCAAAGAGAGATTAGCAGATAGTTTTTTGAACACTGTACGTCAACTGCAACTGAACAATAACCTTTCGGAAGCGAAGGTGGAGGTGCTATCAAGGGGTGATTACCGTACTGACAAAGGCAAGTCAAAAATCGAGAGTTCTGGGGGTCAATCCATGGTGAAACTTGGTGGGCAGAGTGAGACATTAAGTGGCAGTATATCAAATCAAATTAGTGAGGATAAGGGTGGTAAAAACAAGCAACGCAAGAAAACTTCTAAGTTCCTTAGATCCCGCCTTGGTGATGCTTCTGCTGAATCAACTTTAGATATTGAAAATTCACAGACTGATTCAGATCCGAAAACTACAAATGGCTTAAACAGTAACAAGAATGGCACTGGAAGTATGCCTGCACGAGGTGTTTGGAGAAACAGTGGAGGCAAAAAACTCTTTTCCTAA 2322 0.441 MDDCCAVCAEPLEWVSYGPCFHRDVCSTCVSRLRFICDDRRCCICKTPSDVVFVTKALGDYTRMISDFSSLPSDVREGQVGSYWYHEDTNAFFDDVDHYKMIKAMCRLSCSVCDKLEDQPHDPSKRRGMMFRNIEQLKGHLFHRHRLLMCSLCLEGRKIHFRQDHFLCEDEACLAKKFIVFQSEQEMKRHNAVEHGGRMSRSQRNAALQASVFIFSQIPTSFRYRHGNEQDRRHGRGRTFHRDVSESQLSMAIEASLEASNAGHMFHDPPTSDTGQVDVHNGNANIDSVQPLESSASSRYLQVLGQNSSGAPLENSSFPPLPKASRKGKQKSKHGSEGSSSNSMAAHLRRHRNVSVINSANAWPAASRGPTQPLSNPTLSRLSTNTAPGVSRNSGPVRTVINSAPAPSTYASSVQPMQRTARETRDNCGIVHSASAPNITQGSPVAPSISDFPPVSAAQVRTLAASSRSLLNAKDVRQSSLVAPSISDFPPVSASQVRNLATSSRSSLNAEDVHAANKLLIEKIRSTLDFDEDRYALFKDFSAQYRQGIIDTPTYLHYVQQFGLSHLVHELARLCPDVQKQKELVECYNASLQKNIILENGSSHTSTHRKNGNISQKSKGKSVDAGVSNPKERLADSFLNTVRQLQLNNNLSEAKVEVLSRGDYRTDKGKSKIESSGGQSMVKLGGQSETLSGSISNQISEDKGGKNKQRKKTSKFLRSRLGDASAESTLDIENSQTDSDPKTTNGLNSNKNGTGSMPARGVWRNSGGKKLFS 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0542 773 MobiDBLite consensus disorder prediction 274 293 - -
Lal12g0542 773 MobiDBLite consensus disorder prediction 665 773 - -
Lal12g0542 773 MobiDBLite consensus disorder prediction 403 422 - -
Lal12g0542 773 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Lal12g0542 773 CDD RING-HC_ZNF598 5 46 IPR041888 -
Lal12g0542 773 PANTHER ZINC FINGER PROTEIN 598 1 159 IPR044288 GO:0061630|GO:0072344
Lal12g0542 773 PANTHER ZINC FINGER PROTEIN 598 478 772 IPR044288 GO:0061630|GO:0072344
Lal12g0542 773 PANTHER ZINC FINGER PROTEIN 598 159 479 IPR044288 GO:0061630|GO:0072344
Lal12g0542 773 MobiDBLite consensus disorder prediction 728 756 - -
Lal12g0542 773 MobiDBLite consensus disorder prediction 262 293 - -
Lal12g0542 773 MobiDBLite consensus disorder prediction 673 702 - -
Lal12g0542 773 MobiDBLite consensus disorder prediction 599 629 - -
Lal12g0542 773 MobiDBLite consensus disorder prediction 307 345 - -
Lal12g0542 773 PANTHER EBR1 1 159 - -
Lal12g0542 773 PANTHER EBR1 478 772 - -
Lal12g0542 773 PANTHER EBR1 159 479 - -
Lal12g0542 773 MobiDBLite consensus disorder prediction 361 397 - -
Lal12g0542 773 MobiDBLite consensus disorder prediction 599 623 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0542 Lal-Chr12 3875560 3879373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0542 1 772 C2H2 Transcription Factor Family AT2G47090 37.215 2.62e-129 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0542 K22381 - gmx:100799878 660.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0542 12 3875560 3879373 Lal12g0542 12 3875560 3879373 ECH