Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0527 ATGAAATTGGTTATATTATTATTATTATTATTATTATGTTGCATGGTTGATTGTGGTAATGTATATGATAAAACACTAGAAGCTTCATCAACTATTATACCATTAAACAAAAGGAGTGAAACACAGCCTCCAATTTCTGGTTTTCATAGTATTCCTCCTCTTAGTTCAGTTGATGTTGAAGTTCCTTCTCCTTTGCCACGCCTTCCATTGTCTCCTTATGTTTCAAATTGTTGTAAACAATACATGGTTTTGAAACGAGGGAGTAAGGGATGCCACTGTGCTTATCCCATAAAACTAGACATTCTTCTTTTGAACGTCTCTCAAGACCCTAACTGGGGTATTTTTCTTGATGAATTTTCCGCCCAGCTTGGGCTCAAAACTACCCAAGTTCAAATCGTCAACTTTTATATGCCCACCATATCGACGTTGAATATATCGATGGATATTACTCCACATAAAGGGATCAGTTTCTCTGCTGGTGAAGCATCAAGAATAAACTCTTCGCTTCTACAGCACAAGGTTAAACTAGACCATAGTTTAGTGGGTGACTTCAGACTTCTCAATATAACCTGGTTTCAACCTCCACCTCCTTCTCAAGCTCCTACTGTTGATGTGTCACCTAAAACTCCTGTGTATCATTCACCCACAGCTACAAAATCAAGAACTTCAGACAGGGGAAGGCATTCAGATTTGCTTCTTATTCTTGGAATTGTTATTGCCATACTCTTGATTTCCGTTATATGTGTACTTATACTTTGTTTATGCACATGGAGGCCAAAAACAAATAAAGTCCCCACAGAAACTGAAAAGCCAAGGATGGAAAGTCCAGTTGCAGCTGTCAGAGCTATTCCTCATCCATCCAGTACACGCTTTATTGCTTATGAAGAACTTAAAGAAGCAACAAAGAATTTCGAACCAGCAAGCGTACTTGGAGAAGGAGGTTTTGGTAGAGTTTTTAAAGGTGTCTTAAATGATGGGACCGCTGTTGCAATCAAGAGGCTTACTAGTGGAGGGCAACAAGGCGACAAAGAGTTTTTGGTTGAGGTTGAGATGCTTAGCCGATTGCATCACCGTAACCTTGTAAAACTGGTTGGATACTATAGTAATCATGATGCATCACAGAATCTACTTTGTTACGAGCTTGTCCCAAATGGAAGTTTGGAGGCCTGGCTTCATGGTCCCTTGGGAATAAATTGTCCTTTGGATTGGGACACGAGAATGAAGATTGCGCTTGATGCTGCAAGAGGACTTGCATACCTTCATGAAGATTCACAGCCCTGTGTTATACACAGAGATTTTAAGGCATCCAACATATTGCTTGAGAACAACTTTCATGCTAAAGTGGCAGATTTTGGTCTTGCTAAAAAGGCACCTGAAGGCAGAGCGAATTACCTGTCTACTCGTGTCATGGGCACATTTGGACTTGAGATGGAATTGAAACTGTTATGTAGGTATGTAGCTCCTGAATATGCTATGACTGGACACCTACTTGTTAAAAGTGATGTTTATAGCTACGGGGTTGTCTTGCTGGAACTTTTGACCGGAAGGAAACCTGTGGATATGTCACAGCCATCTGGACAAGAGAACCTTGTTACTTGGGCAAGGCCAATTCTTAGAGTTAAGGAGCGGCTGGAAGAGCTTGCTGATCCAAGGCTCGAAGGAAGATATCCAAAGGAGGATTTTGTCAGAGTTTGCACTATTGCTGCAGCCTGTGTTGCTCCTGAAGCAGGACAACGACCCACAATGGGTGAAGTGGTGCAGTCTCTTAAAATGGTGCAGCGCGTCACAGAATATCATGATTCCATGGTACCCTCATCCAATGCACGACCCAACCTGAGACAGTCTTCTACTACATACGAGTCTGATGGGACATCTTCAATGTTTTCTTCCGGTCCTTACTCTGGTCTGAGTGGCTTTGATTATGACAACATTTCTAGGACGGCGGTTTTCTCTGAAGATCTTCATGAAGGACGATGA 1977 0.4173 MKLVILLLLLLLCCMVDCGNVYDKTLEASSTIIPLNKRSETQPPISGFHSIPPLSSVDVEVPSPLPRLPLSPYVSNCCKQYMVLKRGSKGCHCAYPIKLDILLLNVSQDPNWGIFLDEFSAQLGLKTTQVQIVNFYMPTISTLNISMDITPHKGISFSAGEASRINSSLLQHKVKLDHSLVGDFRLLNITWFQPPPPSQAPTVDVSPKTPVYHSPTATKSRTSDRGRHSDLLLILGIVIAILLISVICVLILCLCTWRPKTNKVPTETEKPRMESPVAAVRAIPHPSSTRFIAYEELKEATKNFEPASVLGEGGFGRVFKGVLNDGTAVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNHDASQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKKAPEGRANYLSTRVMGTFGLEMELKLLCRYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRVKERLEELADPRLEGRYPKEDFVRVCTIAAACVAPEAGQRPTMGEVVQSLKMVQRVTEYHDSMVPSSNARPNLRQSSTTYESDGTSSMFSSGPYSGLSGFDYDNISRTAVFSEDLHEGR 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0527 658 SUPERFAMILY Protein kinase-like (PK-like) 282 591 IPR011009 -
Lal12g0527 658 ProSiteProfiles Protein kinase domain profile. 304 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0527 658 Gene3D Transferase(Phosphotransferase) domain 1 382 609 - -
Lal12g0527 658 Gene3D Phosphorylase Kinase; domain 1 266 381 - -
Lal12g0527 658 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 28 658 - -
Lal12g0527 658 MobiDBLite consensus disorder prediction 198 224 - -
Lal12g0527 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Lal12g0527 658 CDD STKc_IRAK 310 590 - -
Lal12g0527 658 Pfam Protein tyrosine and serine/threonine kinase 308 589 IPR001245 GO:0004672|GO:0006468
Lal12g0527 658 PANTHER OS01G0750732 PROTEIN 28 658 - -
Lal12g0527 658 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Lal12g0527 658 MobiDBLite consensus disorder prediction 601 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0527 Lal-Chr12 3772974 3778035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0527 38 658 Receptor kinase-like Gene Family AT4G02010 69.391 0.0 892
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lal12g0527 PK_Tyr_Ser-Thr 1.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0527 - - gmx:100792818 975.311