Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0526 ATGTCGCGTGAAACGGAAGCAGAAATTACGTTACGTGGTAGAAGACCATCCACCAAAAGATTCAACACCGAATCATTCATGGTTTCCAAATCCACCGATTCTGCTCCCAAACCTTGTAAACAGCATGGAGAGCCAGCAGATGATGATGATGACGATGCTGTTAGAGACTTGTCCGTCAAGATAAATCAGTTGAAAAAGCAAATTCAGGAAGAGAGAACTGTGTTCATTAAAGAAAAAATTCAGAAGAATGAGTACAAACTACAAAGTCATATTTCTGGGGTCACTTCAGCAACATCAAGACGGCACTCTTTGCAAATGGAGGAAAATAGGTCAATTCCATTGCTTTCTTCACGAATTGACCATCCTTTATGTAAAGTCAGTGGTTCCTCCCAGGGTTCAGGAGACAATGACCACAACAATCAAGATATATTAGCTACTACAAGTATCAAGATTCCATACATCGAAAGATTACCACCGTATACATCTTGGATTTTTTTGGACAGAAATCAGAGGATGGCTGAAGATCAGTCAGTTGTTGGAAGACGGCGCATCTACTATGATCAACATGGAAGTGAAGCACTGATATGTAGTGACAGTGAGGAAGAGTTGATAGAATCTGAGGAAGAAAAACATGAGTTTTCTGAGGCTGAAGACCGTGTTCTATGGATGGCATTTGAGGAACATGGGTTAAATGAGGAGGTATTGAATATTGTTAGCCAGTTTGTTGGTGGCACCAGTTTAGAAATTCAGGAAAGGTACAAAAGTATCAAGGAAAAGAATATTAGTAGGTTGGACCAACATTCAGAAGGCTCAAGAGAATATGAATCTCCTGTTGGCATATGTTTGGGGGGAAACCTGAGTGCTGCATTAGATTCTTTTGATAACCTCTTCTGTCGCCGGTGCCTGGTTTTTGACTGTCGTCTGCATGGCTGTTCTCAACCTTTGATATATCCTTGTGAAAAGCTGACAGTTTGGTCCGAGGCTGAAGGTGATAGGAAACCATGCAGTGATCAGTGTTACCTTCAGGATAAGAAAACTACAATTATGAAAGAGACAGATCAGATAATGGCACCCTATAGTGCAGAGGAACCTGGAAATCAAAGTATTACACACCCTCCTACAGAAGTTAATTGTCATGGAGAGCTCAATTTAAATGTTCCTGTCTCAGAAAGTATGGGGAAACGTAAAGTCACAGATCAGTCAGACATAGCTCTATGTGACTCAACATTGTCTTCTGATGATTGTCAGAATTCTTGTAAAAAGCTGAAAAGAATCTCTGATGATGCAGTTACTGCAATCAATAATTCTAGTGAGAACCTAAGTTTGGGTGCATTTCATGAAAGTAAACTCACAATTGCATGTGTAACTTTGGAAAAATCTGTTGAACATACTCCAAATAAGCTAACTGTTTCTTCTAGCATTTCCAATGGTGATCATGACAAAAGTATCGGGGGCAGACCAAAAGATGTCACAAATGGGACAGAATTTAAGTTGTTGTCCAATTCAATGGAACTAAGTCTCACTCATTGGAAACCTCTAGAGAAAGAATTATACTTGAAGGGAGTAGAAATGTTTGGCAGAAACAGTTGCCTCATAGCGAGGAACTTACTTTCTGGCTTGAAGACTTGCATAGAAATAGCTCGTTACATGCAAGCTGGTGGAATGTCCATGCCCCCTGGATCCATTGTTGCACCAAGTTCAATCATGGACGACGAAGGAAAAATTGATGTAGTGTGCACACTGAGAATTATATGCTTATGTCTTATCCAATCCAGTCTTCTTTCTGACCAAGAGATACCATCAAGATCACGGATGCTGAGGAAAAAGGGAAAAACAAGAAAGTTTAAATATTCATGGAAGTCTGCTGGCCACCCATCAGTATGGAAAAGAGTTGCTGATGGGAAGAACCAATCTTGCCAGCAGTATACACCATGTGGATGTCAGCCGATGTGTGGAAAGGATTGCCCTTGTGTTAATGCTGGAACTTGTTGTGAAAAATATTGTGGTTGTTCGAAGAGCTGCAAAAACAGGTTCAGAGGGTGCCATTGTGCCAAGAGTCAGTGCAGAAGTCGACAATGCCCATGCTTTGCTGCTGGACGTGAATGTGACCCAGATGTATGTCGAAATTGCTGGGTTAGTTGTGGGGATGGTTCATTAGGTGAGCCACCTCGGCATGGAGAAGGTCAATGTGGAAATATGAGGCTTCTTTTAAGGCAACAACAGAGGATTCTTTTGGCAAAGTCTGATGTTGCTGGGTGGGGGGCTTTCTTGAAGAATCCAGTTAACAAAAATGATTACCTTGGAGAGTACACAGGCGAACTAATCTCCCACCGAGAAGCAGATAAACGTGGGAAAATTTATGATCGTGCAAACTCTTCTTTCCTCTTTGACTTGAATGATCAGTATGTTCTTGATGCTTATCGCAAAGGAGACAAGTTGAAATTTGCAAACCACTCATCAAACCCCAACTGCTATGCAAAGGTAATGCTGGTTGCTGGAGATCATCGAGTAGGCATCTTTGCCAAGGAACACATTGATGCTAGTGAGGAGCTTTTCTATGATTATTGCTATGGTCCAGATCAAGCACCGCCATGGGCTCGTAAACCTGAAGGTTCCAAGAGAGATGAATCATCAGTTTCTCAAGGGAGAGCAAAGAAACATCAGTCTCATTGA 2673 0.4149 MSRETEAEITLRGRRPSTKRFNTESFMVSKSTDSAPKPCKQHGEPADDDDDDAVRDLSVKINQLKKQIQEERTVFIKEKIQKNEYKLQSHISGVTSATSRRHSLQMEENRSIPLLSSRIDHPLCKVSGSSQGSGDNDHNNQDILATTSIKIPYIERLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEELIESEEEKHEFSEAEDRVLWMAFEEHGLNEEVLNIVSQFVGGTSLEIQERYKSIKEKNISRLDQHSEGSREYESPVGICLGGNLSAALDSFDNLFCRRCLVFDCRLHGCSQPLIYPCEKLTVWSEAEGDRKPCSDQCYLQDKKTTIMKETDQIMAPYSAEEPGNQSITHPPTEVNCHGELNLNVPVSESMGKRKVTDQSDIALCDSTLSSDDCQNSCKKLKRISDDAVTAINNSSENLSLGAFHESKLTIACVTLEKSVEHTPNKLTVSSSISNGDHDKSIGGRPKDVTNGTEFKLLSNSMELSLTHWKPLEKELYLKGVEMFGRNSCLIARNLLSGLKTCIEIARYMQAGGMSMPPGSIVAPSSIMDDEGKIDVVCTLRIICLCLIQSSLLSDQEIPSRSRMLRKKGKTRKFKYSWKSAGHPSVWKRVADGKNQSCQQYTPCGCQPMCGKDCPCVNAGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRHGEGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIDASEELFYDYCYGPDQAPPWARKPEGSKRDESSVSQGRAKKHQSH 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0526 890 MobiDBLite consensus disorder prediction 20 36 - -
Lal12g0526 890 Pfam SET domain 752 855 IPR001214 GO:0005515
Lal12g0526 890 SMART CXC_2 676 713 IPR033467 -
Lal12g0526 890 MobiDBLite consensus disorder prediction 1 52 - -
Lal12g0526 890 ProSiteProfiles CXC domain profile. 628 727 IPR026489 -
Lal12g0526 890 Gene3D SET domain 642 857 IPR046341 -
Lal12g0526 890 SMART set_7 741 862 IPR001214 GO:0005515
Lal12g0526 890 Coils Coil 196 217 - -
Lal12g0526 890 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 50 888 - -
Lal12g0526 890 MobiDBLite consensus disorder prediction 867 883 - -
Lal12g0526 890 SUPERFAMILY SET domain 612 861 IPR046341 -
Lal12g0526 890 ProSiteProfiles SET domain profile. 741 856 IPR001214 GO:0005515
Lal12g0526 890 MobiDBLite consensus disorder prediction 1 19 - -
Lal12g0526 890 CDD SET_EZH 741 857 - -
Lal12g0526 890 MobiDBLite consensus disorder prediction 862 890 - -
Lal12g0526 890 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 50 888 IPR045318 GO:0006338|GO:0018024
Lal12g0526 890 MobiDBLite consensus disorder prediction 468 489 - -
Lal12g0526 890 Coils Coil 54 74 - -
Lal12g0526 890 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 5 890 IPR025778 GO:0031519
Lal12g0526 890 Pfam CXC domain 680 711 IPR041355 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0526 Lal-Chr12 3755396 3769052 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0526 730 859 C2H2 Transcription Factor Family AT2G23740 26.531 4.78e-09 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lal12g0526 SET 1.2e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0526 12 3755396 3769052 Lal12g0526 12 3755396 3769052 ECH