Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0525 ATGGCTTCGATTCAACGCGCTGCTGTGAGTTCAGGATCCGAAGGTGGAGATCCTGCTTCGATAGACGAGAGGAAGAGGAAGAGGATGATATCGAATCGCGAATCGGCGAGGCGATCGCGGTTGAGGAAACAGAAGCTTCTGGAAGACTTGACTGAGGAAGTGAATCGTTTGCAAGGAGCGAGCAAGGAGATAACTGAGACCATAAAGAAGAAGGAAGATGCATATTTGAAGATGGAATCTGCGAACAACATTCTCAGAGCTCAGACAATGGAGCTCACAGATCGATTACAGTCTCTGAATTCGATCATTAAGAGGGCTGAAGAGGTTAACGGTAACAGTTTCTCCATTGAGAAGCCTCAGATTTCAGATCCACTCATGAACCCGTGGCAGCTGAGTTATCCTTTTCATCCTCTAATGGCGTCCCCTGATATGTTCTTGCATTGA 444 0.4685 MASIQRAAVSSGSEGGDPASIDERKRKRMISNRESARRSRLRKQKLLEDLTEEVNRLQGASKEITETIKKKEDAYLKMESANNILRAQTMELTDRLQSLNSIIKRAEEVNGNSFSIEKPQISDPLMNPWQLSYPFHPLMASPDMFLH 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0525 147 MobiDBLite consensus disorder prediction 1 40 - -
Lal12g0525 147 Coils Coil 89 109 - -
Lal12g0525 147 SMART brlzneu 20 84 IPR004827 GO:0003700|GO:0006355
Lal12g0525 147 PANTHER BZIP TRANSCRIPTION FACTOR 53 1 145 - -
Lal12g0525 147 MobiDBLite consensus disorder prediction 18 40 - -
Lal12g0525 147 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 22 70 IPR004827 GO:0003700|GO:0006355
Lal12g0525 147 Gene3D - 22 77 - -
Lal12g0525 147 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 145 - -
Lal12g0525 147 SUPERFAMILY Leucine zipper domain 24 72 IPR046347 GO:0003700|GO:0006355
Lal12g0525 147 CDD bZIP_plant_GBF1 25 75 IPR045314 GO:0003700|GO:0006355
Lal12g0525 147 Coils Coil 33 67 - -
Lal12g0525 147 Pfam bZIP transcription factor 24 82 IPR004827 GO:0003700|GO:0006355
Lal12g0525 147 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 27 42 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0525 Lal-Chr12 3753075 3753518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0525 22 145 bZIP Transcription Factor Family AT3G62420 55.645 1.16e-43 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal12g0525 bZIP_1 9.7e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0525 K25786 - gmx:778130 178.718
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0525 12 3753075 3753518 Lal12g0525 12 3753075 3753518 ECH
Lal12g0525 12 3753075 3753518 Lal13g0528 13 3439023 3439472 ECH
Lal12g0525 12 3753075 3753518 Lal13g0528 13 3439023 3439472 LSH