Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0510 ATGGTAAGGACTCCTTGTTGGGAGAAAGTTGGGTTGAAGAAGGGAATGTGGACAGAAGAGGAAGATGACATTTTGAGAAAATATATTCAGGAAAATGGTGAAGGTTCATGGAGATCGTTGTCCAAGAATGCAGTGAATCACTTGCCGGGTAGAACAGACAATGAGATTATGAACTATTGGAATTCGCACCTCAGCTGCAAAATCTATAATTTCAGGAAACAAGCTACTATAACAGACACAGATCTTACACCCAAACTAGAAAATCCTCCCAAGCCTAGAAGTTGTAGAACCAGCCGTTGA 300 0.41 MVRTPCWEKVGLKKGMWTEEEDDILRKYIQENGEGSWRSLSKNAVNHLPGRTDNEIMNYWNSHLSCKIYNFRKQATITDTDLTPKLENPPKPRSCRTSR 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0510 99 CDD SANT 17 64 IPR001005 -
Lal12g0510 99 SUPERFAMILY Homeodomain-like 9 69 IPR009057 -
Lal12g0510 99 SMART sant 13 66 IPR001005 -
Lal12g0510 99 Gene3D - 11 69 - -
Lal12g0510 99 ProSiteProfiles Myb-like domain profile. 9 64 IPR001005 -
Lal12g0510 99 PANTHER MYB-RELATED PROTEIN P 3 44 - -
Lal12g0510 99 PANTHER MYB-RELATED PROTEIN P 45 87 - -
Lal12g0510 99 MobiDBLite consensus disorder prediction 79 99 - -
Lal12g0510 99 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 68 IPR017930 -
Lal12g0510 99 Pfam Myb-like DNA-binding domain 14 64 IPR001005 -
Lal12g0510 99 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 45 87 - -
Lal12g0510 99 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 3 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0510 Lal-Chr12 3613738 3614926 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0510 1 99 MYB Transcription Factor Family AT2G47460 40.645 7.92e-26 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal12g0510 Myb_DNA-binding 2.4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0510 K09422 - mnt:21385492 110.153