Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0493 ATGTCTCGTGTAGCAGGAGCAGCGAAGGGGAAGAAGAAGGGAGCAACCTTTGTGATAGAATGCGCCAAGCCTGTGGAGGATAAGATTATGGATATCGCTTCACTGGAGAAGTTCCTTCAGGAGAGGATCAAAGTTGGTGGCAAAGCTGGCGCACTCGGTGATTCCGTTACCGTTACTCGTGACAAGACTAAGATCACCGTCACCTCCGATTCCAATTTCTCCAAACGGTATCTGAAGTACTTGACCAAAAAGTACTTGAAGAAGCACAATGTTAGGGATTGGCTTCGGGTGATTGCTTCCAACAAAGACAGGAATGTCTATGAGTTGAGATACTTCAACATTGCAGAGAATGAGGCTGAAGAGGAAGACTAA 372 0.4624 MSRVAGAAKGKKKGATFVIECAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTRDKTKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEAEEED 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0493 123 Pfam Ribosomal L22e protein family 13 121 IPR002671 GO:0003735|GO:0005840|GO:0006412
Lal12g0493 123 PANTHER 60S RIBOSOMAL PROTEIN L22 1 123 IPR002671 GO:0003735|GO:0005840|GO:0006412
Lal12g0493 123 PANTHER 60S RIBOSOMAL PROTEIN L22-2 1 123 - -
Lal12g0493 123 Gene3D - 4 123 IPR038526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0493 Lal-Chr12 3525372 3526754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0493 1 123 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 83.871 1.96e-63 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0493 K02891 - cit:102610337 212.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0493 12 3525372 3526754 Lal12g0493 12 3525372 3526754 ECH
Lal12g0493 12 3525372 3526754 Lal13g0488 13 3162009 3163914 ECH