Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0472 ATGGCGGTTCGTGCAAAAAGTGTTCCTCACATGTCTATGTCTGACATGAAGGGCCTCACCATCCAAGTCATCACTGGTCGATGGTTTGTGGTGTTTGTCTCCTTCATAATTTTGTCAGTCTCTGGAGCCACCTACATGTTTGGTCTCTACTCTAATGATATTAAAACTTCTCTTGGTTATGACCAAACCACTCTCAACCTCATCAGTTTCTTCAAGGACTTAGGTGCCAACGTTGGTGTCCTCTCTGGTCTAATTAATGAGATCACATCGCCCTGGGTGGTACTAGCCATAGGTTCAGTTCTCAACTTCTTTGGCTACTTTATGATATGGTTAGCTGTGACTGGAAGAATAGCCAAACCTCAAGTATGGCACATGTGCTTGTATATCTACTTAGGTGCTAACTCTCAAACTTTTGCCAACACTGGCTCCTTTGTCACTTGTGTCAAGAACTTCCCACAAACCCGTGGGGTTGTGATAGGCCTCCTCAAAGGTTATGTAGGTCTTAGCGGAGCTATCATTACACAACTCTACTTTGCTTTTTACTACAATGATACTAAGGATTTGATTTTGCTCATTGCTTGGCTTCCAGCTGCTATATCCTTTGTTTTTATTCGAATTGTTAGATATATGAAGGTCACTCATCAGCCTAATGAGCTCAGTGTTTTCTATAAGTTTTTGTATACTTCACTTGGCCTTGCTGGGTTTCTATTGATTATGATCATAGTACAAAGAAAAGTTCCTTTCACACAAAGTGAGTATGGTGTAAGTGCTGCTGTGGTACTTTTATTGCTCTTCCTTCCATTGGTGGTTGTTTTCTGCGAACAATTTAAGATCCAGCAGAGCCAAAACCCTGTGTTTGTTGACCCCTTACCGGTGGAAACAGTATCTGAAGACAAGAATGATAAATCCTACTCTCTTTCACTAGCCCCAACATCAAATAGTGATGATGCAAGAGATTCCACAGAAGTTCAAGAAACAAGATGGTGGCAAAATATTTTTAGTCCCCCAGAAAGAGGTGAAGACTATACCATACTTCAAGCCCTTTTCAGCATTGACATGTTAATACTATTCATCGCTAGCATTTGTGGTTGTGGGGGTACTTTAACAGCAATGGACAACATGGGTCAGATTGGAACATCTCTAGGATACCCAAAGGAAAACATAAGCACATTTGTGTCCCTAGTGAGCATTTGGGGTTACCTAGGACGTATTTTTTCTGGGTTTGTTTCTGAACATTTGCTAACAAAGTACAAGTTTCCTAGAACTATCCTACTTAGTATGACACTAATCGTATCATGTGCTGGTCATCTTCTAATAGCCTTTGATGTACCCAATGGTCTCTATGTAGCTTCAGTAATCATTGGGTTTTGTTTTGGTGCACAAATGCCTTTAGTTTTTGCCATAATATCAGAGTTATTTGGACTCAAGTATTTTGCTACTCTCTATAACTTGGTCGGAGTAGGAAGTCCAATTGGGCTATATCTGCTTAATGTGATGGTCACTGGGCATTTGTATGACAAAGAAGCTAAGAGACAATCGCTATCAAACGGGGTCGAAAGAAGGATTGGTCAAGAATTGAATTGTGTTGGTGCAAATTGCTTCAAGTTATCATTCTTTATTATCACTGCAGCAACTTGCTTTGGAGCCATTATTTCGCTCATATTGGTAGCGAGGACATTAGAGTTTTATAAAAGTGACATATACAAGAGATACAAGAAGCAGGATGAAGGTCCTAAGACGGAGATGTTGGTGGTCCTTAATGGTGGCGACAGAAAACAAAAGCCCAAAGTTGGGATGTGA 1800 0.405 MAVRAKSVPHMSMSDMKGLTIQVITGRWFVVFVSFIILSVSGATYMFGLYSNDIKTSLGYDQTTLNLISFFKDLGANVGVLSGLINEITSPWVVLAIGSVLNFFGYFMIWLAVTGRIAKPQVWHMCLYIYLGANSQTFANTGSFVTCVKNFPQTRGVVIGLLKGYVGLSGAIITQLYFAFYYNDTKDLILLIAWLPAAISFVFIRIVRYMKVTHQPNELSVFYKFLYTSLGLAGFLLIMIIVQRKVPFTQSEYGVSAAVVLLLLFLPLVVVFCEQFKIQQSQNPVFVDPLPVETVSEDKNDKSYSLSLAPTSNSDDARDSTEVQETRWWQNIFSPPERGEDYTILQALFSIDMLILFIASICGCGGTLTAMDNMGQIGTSLGYPKENISTFVSLVSIWGYLGRIFSGFVSEHLLTKYKFPRTILLSMTLIVSCAGHLLIAFDVPNGLYVASVIIGFCFGAQMPLVFAIISELFGLKYFATLYNLVGVGSPIGLYLLNVMVTGHLYDKEAKRQSLSNGVERRIGQELNCVGANCFKLSFFIITAATCFGAIISLILVARTLEFYKSDIYKRYKKQDEGPKTEMLVVLNGGDRKQKPKVGM 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0472 599 Gene3D MFS general substrate transporter like domains 349 564 IPR036259 -
Lal12g0472 599 MobiDBLite consensus disorder prediction 301 317 - -
Lal12g0472 599 MobiDBLite consensus disorder prediction 301 322 - -
Lal12g0472 599 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 10 594 - -
Lal12g0472 599 CDD MFS_Mch1p_like 26 549 - -
Lal12g0472 599 Pfam Nodulin-like 27 272 IPR010658 -
Lal12g0472 599 PANTHER MFS TRANSPORTER 10 594 - -
Lal12g0472 599 SUPERFAMILY MFS general substrate transporter 26 559 IPR036259 -
Lal12g0472 599 Pfam Major Facilitator Superfamily 357 554 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0472 Lal-Chr12 3377072 3378871 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0472 15 574 Nodulin-like Gene Family AT2G39210 65.248 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0472 - - gmx:100808975 844.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0472 12 3377072 3378871 Lal13g0468 13 3030143 3031981 ECH
Lal12g0472 12 3377072 3378871 Lal12g0472 12 3377072 3378871 ECH
Lal12g0472 12 3377072 3378871 Lal13g0469 13 3034144 3035946 LSH