Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0471 ATGACAGTAGCAACAGGAGGCGTTGGTCACGGATCTATGGCCAACATGAAGAGCCTAACCATCCAAGTCATCACCGGTAGGTGGTTCGTGGTGTTTGTCTCCTTCCTAATCATGGCAGCCGCCGGAGCCACCTATATGTTTGGCCTATACTCCTCAGACATAAAAGAAACACTTGGCTATGACCAAACCACTCTCAACCTCCTTAGTTTCTTCAAGGACTTAGGTGGCAACTTTGGTGTTCTCTCTGGCCTAATCAATGAGATAACACCACCCTGGGTTGTACTATCCATGGGTTCAGTTCTCAACTTCTTTGGTTACTTCATGATATGGCTAGCTGTGACCAAAAAAATAAAAAAACCTCAAGTGTGGCACATGTGCCTCTACATCTGCATAGGTGCTAACTCTCAATCTTTTGCAAACACTGGATCCCTTGTCACGTGCGTAAAGAATTTCCCACAAAGCCGTGGGGTTGTGTTGGGCATTCTCAAAGGCTATGTTGGTCTTAGTGGAGCCATCATCACACAACTATACTTTGCTTTTTATTACAATGACACAAAGGCTTTGATTTTGCTCATAGCTTGGCTTCCAGCTGCTATTTCCTTTGTTTTTCTTCGAACCATTCGATATATGAAGCCGGTTAAGCAGCCTAATGAGCTCAGTGTGTTCTACAAGTTCTTGTATATTTCACTTGGTCTTGCTGGGTTTCTACTTGTTATGATTGTAGTGCAGAAACAGGTGCATTTCACACAAGGTGAGTATGGTGTGAGTGCTGCTGTGGTGCTTTTCATGCTCTTCCTCCCTCTTGCTGTTGTTTTTGGTGAACAATTTAAGATCCAGCAGAACCAAAAACTTGCATTTTTTGACCCATCATCGGTGAAAATAGCTACTGAAGCTAAGAATAGTAACTCTAATCCTAGCTCTCTTTCAACTTCAAGAGTTCCCACAGAAGCTGAAGAAACAAAATGGTGGGAAAATGTGTTTAGTCCACCAGAGAGAGGTGAGGACTATACAATACTTCAAGCACTTTTCAGCATAGACATGATAATATTATTCATCGTTACCACTTGTGGTGTCGGTGGTACTCTAACAGCAATTGATAACTTGGGTCAAATTGGAACTTCACTAGGATACCCAAAGACAAGCATAAGCACTTTTGTATCCTTAGTGAGCATTTGGAATTACCTAGGACGTGTCTTTTCTGGTTTTGTTTCAGAACATTGTCTAACAAAGTATAAGTTCCCTCGAACTCTCATGCTCACTTTGACTCTCCTCTTATCATGTGTTGGTCATCTTTTGATAGCATTTGATGTAACTAATGGTCTCTATGCAGCTTCAGTTATAATTGGGTTTTGTTTTGGTGCACAGTGGCCTTTAGTTTTTGCCATAATATCGGAGCTATTTGGACTTAAGTATTATGCTACTTTGTACAACTTTGGAGGAGTGGCTAGTCCAATTGGGCTATATATTCTTAATGTGAGAGTCACTGGCCATTTGTATGACAAAGAAGCTAATAGGCAATTGGTAGCATCAAGGGTCATAAGAAAAGTAGGTCAAGAATTGAATTGTGTTGGTGCAAGTTGCTTCAAGTTGTCCTTCATTATTATCACGACAGCGACTTTCTTTGGTGCTATTATTTCGCTGGTTTTGGTGTCTAGGACAATTAAGTTTTATAAAAGTGATCTTTACCAGCGGTACAAGGAGCAGCCTCTAGTACAACCGGCGGTGGTTCAGAACGGCGGCGAGGGAGGACAAGAACCAAAAGTTGGGTTGTGA 1773 0.4174 MTVATGGVGHGSMANMKSLTIQVITGRWFVVFVSFLIMAAAGATYMFGLYSSDIKETLGYDQTTLNLLSFFKDLGGNFGVLSGLINEITPPWVVLSMGSVLNFFGYFMIWLAVTKKIKKPQVWHMCLYICIGANSQSFANTGSLVTCVKNFPQSRGVVLGILKGYVGLSGAIITQLYFAFYYNDTKALILLIAWLPAAISFVFLRTIRYMKPVKQPNELSVFYKFLYISLGLAGFLLVMIVVQKQVHFTQGEYGVSAAVVLFMLFLPLAVVFGEQFKIQQNQKLAFFDPSSVKIATEAKNSNSNPSSLSTSRVPTEAEETKWWENVFSPPERGEDYTILQALFSIDMIILFIVTTCGVGGTLTAIDNLGQIGTSLGYPKTSISTFVSLVSIWNYLGRVFSGFVSEHCLTKYKFPRTLMLTLTLLLSCVGHLLIAFDVTNGLYAASVIIGFCFGAQWPLVFAIISELFGLKYYATLYNFGGVASPIGLYILNVRVTGHLYDKEANRQLVASRVIRKVGQELNCVGASCFKLSFIIITTATFFGAIISLVLVSRTIKFYKSDLYQRYKEQPLVQPAVVQNGGEGGQEPKVGL 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0471 590 SUPERFAMILY MFS general substrate transporter 27 555 IPR036259 -
Lal12g0471 590 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 11 569 - -
Lal12g0471 590 PANTHER MFS TRANSPORTER 11 569 - -
Lal12g0471 590 Pfam Major Facilitator Superfamily 351 550 IPR011701 GO:0022857|GO:0055085
Lal12g0471 590 CDD MFS_Mch1p_like 26 543 - -
Lal12g0471 590 Pfam Nodulin-like 27 272 IPR010658 -
Lal12g0471 590 Gene3D MFS general substrate transporter like domains 342 558 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0471 Lal-Chr12 3370397 3375025 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0471 14 568 Nodulin-like Gene Family AT2G39210 69.231 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0471 - - gmx:100808975 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal20g0292 20 2214355 2224046 Lal12g0471 12 3370397 3375025 ECH
Lal13g1445 13 13945815 13947509 Lal12g0471 12 3370397 3375025 ECH
Lal12g0471 12 3370397 3375025 Lal12g0471 12 3370397 3375025 ECH
Lal12g0471 12 3370397 3375025 Lal13g0468 13 3030143 3031981 LSH