Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0460 ATGAAGGTTAGTTGCAATGGGTGCCGCATTCTCCGTAAAGGTTGTGGTGACAACTGTGTAATTAGGCCATGCCTTGAGTGGATTAACTCACCGGAGTCCCAAGCCAATGCTACTATGTTCCTTGCCAAATTCTATGGCCGCACTGCCTTAGTCAACCTTATCTCCGCCGCTCCAGAACATCTTCGAACAGATGTGTTCAAATCATTGTTGCATGAGGCTTGTGGGAGATTAGTGAATCCAACTTATGGGTCAATGGGTTTGTTATGGAGCGGAGATTGGAACCGATGCGAAGCTGCCGTTGACGCTGTCTTGAATGGATCAAGAATTCTGGACGTGGCAGGTTTTGATTGGCATACAACAGGGGCACATGTTGGTGGTGTTGAAAATGTTTTCCCAGCATGTGATATACGTCACGTGCCTAGAGCAAGGGACGTAGACAACGTAGGAGAAAGAGGTCGATCCAAGAGAGCAAGGAGAACCGTGAAGGCCACACCACAAGTGGGTGTGGTTGACTCACCTGAGAATGAGAGCATGGAAACTGTGGAGCAACCATTGAACCAGCAACCATTGAACCAAGCCGTTGCTGAAACCGAGTTCATCAACTTAGAGCTCACACTAGCTTTCCCTGGTTAG 633 0.4834 MKVSCNGCRILRKGCGDNCVIRPCLEWINSPESQANATMFLAKFYGRTALVNLISAAPEHLRTDVFKSLLHEACGRLVNPTYGSMGLLWSGDWNRCEAAVDAVLNGSRILDVAGFDWHTTGAHVGGVENVFPACDIRHVPRARDVDNVGERGRSKRARRTVKATPQVGVVDSPENESMETVEQPLNQQPLNQAVAETEFINLELTLAFPG 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0460 210 Pfam Lateral organ boundaries (LOB) domain 4 101 IPR004883 -
Lal12g0460 210 PANTHER LOB DOMAIN PROTEIN 1 209 - -
Lal12g0460 210 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 209 - -
Lal12g0460 210 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0460 Lal-Chr12 3264040 3265114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0460 1 206 AS2 family AT3G02550 44.872 7.00e-59 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal12g0460 LOB 5.6e-22 No_clan