Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal12g0448 | ATGGGTTCAAAAATTGAAGGACCATCTACCCCAGCAAATCGACGTGACCCTTATGAGGTTTTGTCTGTAACAAGAGACTCTACCGATCAAGAAATCAAATCTGCTTACAGAAAGCTAGCTCTCAAGTATCACCCTGACAAGAATGCCAGCAATCCTGAAGCTTCGGAACTATTTAAGGAGGTTGCATATTCTTATAGCATCTTGTCTGACCCAGAGAAGAGAAGGCAGTATGACAGTGCAGGATTTGAGGCACTTGATGCTGATAACATGGACATGGAAATTGACTTATCTAATCTCGGGACTGTCAACACAGTGTTTGCAGCTTTATTCAGCAAGCTGGGTGTCCCTATAAAGACTACGGTTTCAGCCAATGTACTTGAAGAAGCTCTTAATGGCACTGTTACAGTCAGACCCCTCCCTATTGGAACATCAGTTAGCGGAAAGGTAGAGAAGCAATGTGCTCATTTTTTCGGTGTGACAATAAATGAGCAGCAAGCTCAGTCAGGGATTGTAATAAGAGCTACTTCAACCGCACAAAGCAAATTCAAGTTGCTCTACTTTGAACAAGATGCAAATGGTGGTTATGGTTTGGCGTTACAGGAAGATAGCGAGAAAACTGGCAAGGTGACATCTGCAGGAATGTATTTCTTACATTTTCAAGTGTACAGAATGGATTCAACTGTGAATGCGTTAGCAATGGCCAAGGATCCTGAAGGGGCTTTCTTTAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTCTCAGAACTAAAGCCTGGCACTCATATCTTTGCTGTTTATGGGGATAACTTCTTCAAGACTGCTAGCTATACAATTGAGGCAGTATGTGCAAAGTCACATGAAGACACCACCCAAAAGCTTATGGACACTGAGGCTCAAATTTTAAGAAAGAGGAATGAACTACGCCAATTTGAAGCAGAATATAGAAATGCACTGGCGCGCTATCAGGAAGTGACAGATAGATACACAAAAGAAAAACAGTCTGTAGATGAACTTCTGAAACAAAGGGATAGTATTCATTCTTCCTTCACTGTTGTCAAGTCAACCACTATTAGTGGGAGTTCTAGTATTTTAGGCAATGGAAGTTCTAGCAAAATTTCTGGTGACGGGAGCCCCGAGGATGGAGGGTCAGATGGAAAGGATAAATCTGGCAAAAAGAAATGGTTTAACCTCAATCTTAAGGGTTCTGATAAGAGTCTGATTTAA | 1224 | 0.4167 | MGSKIEGPSTPANRRDPYEVLSVTRDSTDQEIKSAYRKLALKYHPDKNASNPEASELFKEVAYSYSILSDPEKRRQYDSAGFEALDADNMDMEIDLSNLGTVNTVFAALFSKLGVPIKTTVSANVLEEALNGTVTVRPLPIGTSVSGKVEKQCAHFFGVTINEQQAQSGIVIRATSTAQSKFKLLYFEQDANGGYGLALQEDSEKTGKVTSAGMYFLHFQVYRMDSTVNALAMAKDPEGAFFKRLEGLQPCEVSELKPGTHIFAVYGDNFFKTASYTIEAVCAKSHEDTTQKLMDTEAQILRKRNELRQFEAEYRNALARYQEVTDRYTKEKQSVDELLKQRDSIHSSFTVVKSTTISGSSSILGNGSSSKISGDGSPEDGGSDGKDKSGKKKWFNLNLKGSDKSLI | 407 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal12g0448 | 407 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Lal12g0448 | 407 | PANTHER | DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) | 2 | 404 | - | - | |
Lal12g0448 | 407 | PRINTS | DnaJ domain signature | 18 | 36 | IPR001623 | - | |
Lal12g0448 | 407 | PRINTS | DnaJ domain signature | 36 | 51 | IPR001623 | - | |
Lal12g0448 | 407 | PRINTS | DnaJ domain signature | 53 | 73 | IPR001623 | - | |
Lal12g0448 | 407 | PRINTS | DnaJ domain signature | 73 | 92 | IPR001623 | - | |
Lal12g0448 | 407 | PANTHER | CHAPERONE PROTEIN DNAJ 15-LIKE | 2 | 404 | - | - | |
Lal12g0448 | 407 | ProSiteProfiles | dnaJ domain profile. | 16 | 81 | IPR001623 | - | |
Lal12g0448 | 407 | ProSitePatterns | Nt-dnaJ domain signature. | 58 | 77 | IPR018253 | - | |
Lal12g0448 | 407 | CDD | DnaJ | 16 | 70 | IPR001623 | - | |
Lal12g0448 | 407 | MobiDBLite | consensus disorder prediction | 358 | 393 | - | - | |
Lal12g0448 | 407 | SMART | dnaj_3 | 15 | 73 | IPR001623 | - | |
Lal12g0448 | 407 | MobiDBLite | consensus disorder prediction | 358 | 376 | - | - | |
Lal12g0448 | 407 | Coils | Coil | 286 | 341 | - | - | |
Lal12g0448 | 407 | Pfam | DnaJ domain | 16 | 78 | IPR001623 | - | |
Lal12g0448 | 407 | SUPERFAMILY | Chaperone J-domain | 12 | 86 | IPR036869 | - | |
Lal12g0448 | 407 | Gene3D | DnaJ domain | 3 | 98 | IPR036869 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal12g0448 | Lal-Chr12 | 3154364 | 3161015 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal12g0448 | 9 | 89 | C2H2 Transcription Factor Family | AT1G74250 | 41.860 | 2.97e-13 | 69.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal12g0448 | - | - | lang:109336585 | 719.924 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lal12g0448 | 12 | 3154364 | 3161015 | Lal13g0441 | 13 | 2788306 | 2794532 | LSH | |
Lal12g0448 | 12 | 3154364 | 3161015 | Lal24g0356 | 24 | 2522666 | 2528353 | LSH |