Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0446 ATGGCAGCGATACCCTATCACTTCACGTTTCCCATTATCTACATTTCCTTCCTTTCCCATTTCATTCTCTTTGTTCAAACTTCTACCACCCCAGATTTCGACGCTCTCGTTTCATTCAAAACCGCTTCAGATACATCCAAAAAACTTACAATGTGGAATACCACTACGAACCCATGCACTTGGAACGGTGTTTCATGTATCAATAACCGAGTCTCGCGACTCGTTCTTGAAAACCTCGACCTTCAAGGTTCTATTCTCCCCTTAACTTCCCTCACTCATCTTCGAGTTCTAAGCCTCAAGCATAACCGTTTCTCAGGTCCACTTCCTTCTCTCTCTAACTTCACTTCTCTCAAGCTTCTCTTTCTCTCTCATAACGCTTTCTCCGGTGACTTCCCTGCCACTGTTACCTCGCTTTTCTCTCTATACCGTCTCGATCTGTCGTATAATAACTTCTCAGGCGAGATTCCGGCGACGGTTAACCATTTAACCAGTCTTCTCACTCTCCGTCTAGAAAACAACCGTTTTTCCGGTCATATTCCCGGTGTTAGCATTCCCAGCCTTCAAGACTTCAACGTCTCCGGTAACCAACTCTCCGGCGAGATACCGGATTCATTTTCCGGTTTCCCGGAATCCTCTTTCCATCAAAACCCGTATCTTTGTGGGGCTCCGGTTCAGAAATGCAATGACATTGTTGCTGACCCAAGTAAACCCGGTTCAGAAGGTGCCATTGCATCACCGGTTTCGCCATTGCCAACAGTGTCTTCTTCACCGAGTTCGTTACCATCTAACGAAGGATCAAGTAGCAAAAGAACTCATAAAAACGGTAACGGAGGTTCCAAAATAAGCCATGTGGGTTTAATAGCAATTATAGTTGGTGATGTTTTAGTTCTTGCTATAGTGTGTGTACTCCTCTATTGCTACTTTTGGAGGAGTTACTCTAAAAAACTGAGAGAAGGAAAAGGTTCTAAGCTATTCGAGAGCGAAAAGATTGTTTATTCATCGAGCCCATACCCTGCACAAGCAGGGTTTGATAGGGGTAGGATTGTATTCTTTGAAGGTGAGAAAAGGTTTGAGTTGGAGGATTTGCTTCGCGCCTCGGCCGAGATGCTCGGGAAAGGTGGATTTGGAACTGCTTACAAAGCAGTTCTTGATGATGGGAATGTGGTTGCTGTGAAGAGGCTCAAGGATGCACAAATTGGAGGGAAGAGGGAGTTTGAGCAACATATGGAAGTTCTTGGAAGGTTGAGGCATCCGAATATCGTTAGCTTGAGGGCTTATTATTTTGCAAGGGAGGAGAAGTTGCTTGTTTATGATTTCATGCCTAATGCTACATTGTTCTGGCTCCTTCATGGGAACCGTGGACCAGGGCGAACCCCGTTGGACTGGACCACAAGGCTCAAGATAGCAGCAGGAGCGGCACGAGGTGTGGCATTTATTCACAGCTCATGCAAGTCTCTTAGACTCACGCACGGGAACATCAAATCAACAAACATCCTCCTTGACAAGCAAGGAAATGCACGCGTTTCAGATTTCGGGCTCTCCATTTTTGCAGTCCCTGGTGGCAGTTCCAATGGTTACAGAGCCCCGGAGGCAATTGCATCAGACAGTCGAAAACAGTCTCAGAAATATGACGTGTACTCCTTTGGTGTTCTTCTTTTAGAGCTTTTGACCGGGAAGTGTCCCTCTTCCATGGTGGACAGTCATAGTGGGAGTGGGACTATTGATCTTCCTAGGTGGGTCCAGTCAGTGGTGAGGGAAGAATGGACAGCTGAGGTATTTGATATTGAGCTCATGAGGTATAAGGATATTGAGGAGGAGATGGTGGGTTTGTTGCAGATTGCTATGGCTTGTACTGCTGCACCTGATCAACGCCCGAGAATGTGGCACGTGGTCAAGATGATAGACGAGTTGCGTGGGGTCGAGGTATCGCCATGTAATGACATGTTGGACTCTGCCTCTGAATCACCTTCCTTGTCTGAAGATGCATGTGGAGCTAGTCAGTAA 2004 0.4641 MAAIPYHFTFPIIYISFLSHFILFVQTSTTPDFDALVSFKTASDTSKKLTMWNTTTNPCTWNGVSCINNRVSRLVLENLDLQGSILPLTSLTHLRVLSLKHNRFSGPLPSLSNFTSLKLLFLSHNAFSGDFPATVTSLFSLYRLDLSYNNFSGEIPATVNHLTSLLTLRLENNRFSGHIPGVSIPSLQDFNVSGNQLSGEIPDSFSGFPESSFHQNPYLCGAPVQKCNDIVADPSKPGSEGAIASPVSPLPTVSSSPSSLPSNEGSSSKRTHKNGNGGSKISHVGLIAIIVGDVLVLAIVCVLLYCYFWRSYSKKLREGKGSKLFESEKIVYSSSPYPAQAGFDRGRIVFFEGEKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGNVVAVKRLKDAQIGGKREFEQHMEVLGRLRHPNIVSLRAYYFAREEKLLVYDFMPNATLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGVAFIHSSCKSLRLTHGNIKSTNILLDKQGNARVSDFGLSIFAVPGGSSNGYRAPEAIASDSRKQSQKYDVYSFGVLLLELLTGKCPSSMVDSHSGSGTIDLPRWVQSVVREEWTAEVFDIELMRYKDIEEEMVGLLQIAMACTAAPDQRPRMWHVVKMIDELRGVEVSPCNDMLDSASESPSLSEDACGASQ 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0446 667 Gene3D Transferase(Phosphotransferase) domain 1 440 650 - -
Lal12g0446 667 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 26 653 - -
Lal12g0446 667 CDD STKc_IRAK 370 637 - -
Lal12g0446 667 Gene3D Phosphorylase Kinase; domain 1 345 439 - -
Lal12g0446 667 Pfam Protein kinase domain 368 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0446 667 Gene3D Ribonuclease Inhibitor 24 90 IPR032675 -
Lal12g0446 667 MobiDBLite consensus disorder prediction 237 276 - -
Lal12g0446 667 MobiDBLite consensus disorder prediction 248 276 - -
Lal12g0446 667 MobiDBLite consensus disorder prediction 648 667 - -
Lal12g0446 667 Pfam Leucine rich repeat N-terminal domain 31 66 IPR013210 -
Lal12g0446 667 ProSiteProfiles Protein kinase domain profile. 364 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0446 667 PANTHER - 26 653 - -
Lal12g0446 667 SUPERFAMILY Protein kinase-like (PK-like) 368 634 IPR011009 -
Lal12g0446 667 SUPERFAMILY L domain-like 50 209 - -
Lal12g0446 667 Gene3D Ribonuclease Inhibitor 91 232 IPR032675 -
Lal12g0446 667 ProSitePatterns Protein kinases ATP-binding region signature. 370 392 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0446 Lal-Chr12 3141998 3145226 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0446 32 666 Receptor kinase-like Gene Family AT1G68400 66.667 0.0 834
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal12g0446 Pkinase 3.6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0446 - - adu:107467433 1020.76