Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0443 ATGGCCTCTGGTGAAGGGAGGCGGCAGCGCCATCATCATGATCTTGTGCCTCTTGCTGTATTGCTTAAGAGGGAGATGAAGAGTGAGAGGATGGGGAAGCCAACTTTGAGGTATGGACATGCTGCTCAGTCTAAGAAAGGGGAGGATTACTTTCTAGTTAAGACAGATTGTCAGCGAGTGCCTGGGAATTCTTCATCATCCTTTTCTGTATTCGCGATCTTTGATGGACACAATGGAAATGCTGCTGCCATTTTTACAAGGGAGCATTTGTTAAATCATGTGTTGGGTGCTCTTCCTCGAGGGCTTGGACGCGATGAGTGGTTGCATGCTTTGCCTAGGGCATTGGTTGCTGGGTTTGTTAAGACTGATAAGGAATTTCAGTGCAGAGGAGAAACTTCTGGAACCACAGCCACATTTGTGATAGTCGATAGGTGGACTGTGACAGTTGCATCTGTTGGAGATTCTCGTTGTATACTAGATACCCAGGGTGGTGCTGTTACCACTTTAACTGTTGATCACAGACTTGAGGAGAATATTGAAGAGAGGGAACGCGTTACTTCAAGTGGAGGTGAAGTTGGGAGGCTTAGCATTGTTGGTGGTGTGGAGATTGGCCCTCTTCGTTGCTGGCCAGGGGGTCTATGCCTTTCTAGGTCAATAGGAGACATGGATGTTGGGGAGTTCATAGTTCCAATACCATATGTCAAACAAGTGAAGCTATCAAATACTGGTGGGAGACTTATAATTGCTTCTGATGGCATCTGGGATGCTCTATCCTCAGAAACGGCTGCAAAATCTTGTCACGGTTTGCCTGCTGAACTTGCTGCTATGCAGGTTGTAAAGGAAGCATTACGGACAAGAGGATTAAAGGACGATACAACTTGCATAGTAGTTGACATAATCCCTCCAGATAATGAGTTGTCACCAGCACCTCCCCCTAAAAAGCAGAACAAGCTGAGAGACCTTTTGTCGTGGGTGAGGTCCCGTGGTTCCACCAATAAGGTGTCAAAGAATCTTTCTGCTATAAATATTGTGGAGGAACTGTTTGAAGAAGGATCAGCAATGCTTGCTGAAAGATTAGGAAGTTATGACAACTCGGGGAAATCAACATCTGGCCTTTTTGTCTGTGCAATATGCCAAGCCGATCTTGCTCCAAGTGAGGGTATCTCTGTCCATGCAGGTTCTATTTTCTCGATCAGCTCGAAGCCTTGGCAAGGTCCTTTTCTATGTTTAGATTGTCGTGATAAGAAGGATGCGATGGAAGGAAGACGTCCTAGTGGAGTTAAAGTATCATAG 1293 0.4578 MASGEGRRQRHHHDLVPLAVLLKREMKSERMGKPTLRYGHAAQSKKGEDYFLVKTDCQRVPGNSSSSFSVFAIFDGHNGNAAAIFTREHLLNHVLGALPRGLGRDEWLHALPRALVAGFVKTDKEFQCRGETSGTTATFVIVDRWTVTVASVGDSRCILDTQGGAVTTLTVDHRLEENIEERERVTSSGGEVGRLSIVGGVEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSNTGGRLIIASDGIWDALSSETAAKSCHGLPAELAAMQVVKEALRTRGLKDDTTCIVVDIIPPDNELSPAPPPKKQNKLRDLLSWVRSRGSTNKVSKNLSAINIVEELFEEGSAMLAERLGSYDNSGKSTSGLFVCAICQADLAPSEGISVHAGSIFSISSKPWQGPFLCLDCRDKKDAMEGRRPSGVKVS 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0443 430 CDD PP2Cc 38 299 IPR001932 -
Lal12g0443 430 Gene3D - 37 304 IPR036457 -
Lal12g0443 430 ProSiteProfiles PPM-type phosphatase domain profile. 30 299 IPR001932 -
Lal12g0443 430 SMART PP2C_SIG_2 53 299 IPR001932 -
Lal12g0443 430 PANTHER PROTEIN PHOSPHATASE 2C 15-RELATED 7 429 - -
Lal12g0443 430 SUPERFAMILY PP2C-like 29 299 IPR036457 -
Lal12g0443 430 Pfam Protein phosphatase 2C 63 268 IPR001932 -
Lal12g0443 430 PANTHER ALPHABET, ISOFORM E-RELATED 7 429 - -
Lal12g0443 430 SMART PP2C_4 29 297 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0443 Lal-Chr12 3121260 3125682 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0443 1 429 PP2C-type Phosphatase Gene Family AT1G68410 77.931 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0443 - - gmx:100779571 773.852