Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0442 ATGTTATATTGCCAAGTGTCTAGACAAGACAAACATCAGTTATTATACCCTAAAGAACCAAACCTTCTCTATTCTCATTTTTTGCTAAAAAAACACATGGCTTCAGTTTATGTATTCCACTTCCTTTTGTTTTCTCGCCTTATGCTACTTCTCTTGGCTTCTGAAGATAGATATGGAAACCAAGTAAAGTGTCCACCTTCATTTCACTGTGGACATCTTGGCAATATCAGCTACCCTTTCACTGTAACACAAAGCCCTCACTGTGGCTTATTTGTCATAAGCAATTGTGATAATCGATTGAAGTCCAAAGATATCCAACTAGAGAATAATGGGAAATGGTTTTGGGTTATAGGTATTATTCACAATCCTCCTACTTCTCCTAATATTACTATTCAAATTAGAGACTACACTCTCAATAACCTGATGGAATCCAGAAGTTGTGAAGCCTTTAGCAATAATTATACTCTTCCAACCAATTTTACTTTTGGTTCTATTCATATATCTTATAGTCAAATCTTGTTCAAGTGCAATCGCTCCCTTCATGTCAAGCCTCCAAAAGATGTGCATAAATATACAAACTGTTCTGACTATGATCTCTACTACAAGCCTTCGCTTAATCCAAATGATAAGTCTCTGAGTTCTTTGGTAGCATGTACTATGGTCAAACTTCCTATTAAAGATGTGGCTGATGCTGAAGACCCTTTTACGTTTATAACTTCTGATATCATCACTGAAGTGCGATTATCATATGAATGTGCAAATTGCTACTATGTCAAAAGAGGGCAGTGTCACCTTGACAACTCACAGAAATTCCGTTGCATCAATGCTACAGCGAAAAAAGGGTTGAGGTCGAAAGTTAAATTGGCTATAGGTTTTGGTGTTGGAGTTCTAGGCATCTTGATAATTGGGTTGCTATTGATCCTTATACTCTATAAACGGAAACATGCTACTTCAGGCGAAGACTTCCATTCAAGAAATTCTTATTCAGATTCCCCCTCAAATCTACACCTAGAAAGTGGAGGTGTGTACTTTGAAGTTCCAATCTTCTCCTACAAGGATCTTAAAGAAATAACGAACAATTTCGACCATAATAAAGAACTTGGAGATGGAGGCTTTGGGACTGTATACCATGGGAAACTCCAAGATGGACGGGAAGTTGCTGTGAAGCGTTTATACGAGCACAATTATAGGCGAGTAGAACAGTTCATGAATGAAGTTCAGATCCTCACACGTTTGCGGCACACAAATCTTGTGTCCCTCTATGGCTGCACTTCAAAGCACAGCCGCGAACTACTACTTGTGTACGAATATATTTCAAATGGCACCGTTGCTTGTCATCTCCATGGTGGATTAGCAAAGCCTGGCTTACTACCATGGTCTATAAGAATGAAAATTGCCATAGAGACTGCTGCTGCATTGGCTTATCTTCATGCTTCTGATATAATTCACCGCGATGTGAAAACAAACAACATTCTTCTTACCAAAAATTTCTGTGTTAAAGTTGCTGATTTTGGTCTTTCAAGACTATTCCCTACAGATGTGACTCATGTCTCCACAGCTCCACAAGGGACACCGGGTTATGTCGACCCGGAATATCACCAATGCTATCAGCTTACTAGTAAGAGTGATGTATATAGTTTTGGAGTTGTGCTCATTGAGCTAATATCATCTAAGCCTGCTGTTGATATAAACAGGAGTAGGGAAGAAATTAACTTGTCCAATCTAGCTATAAAGAAGATTCAACAAAGCGCAATTAGCGAGCTCGTAGATCCTTGTCTTGGTTTCGGTACAGATAATGAGGTTAAGAGGAAGATAGTTTCCGTGGCGGAGTTAGCTTTTCAATGTTTGCAACGGGACAAGGAATTCAGACCTTCTATGGATGAAGTATTGAATGAATTGAGAAAAATTGAAGCAGTAAAAGATGAGCAAGAGGTTGTAGCCGAAGCCGATGCTCCTGTTGATGGAGTTTCACTTGGTATTGTACATACACATTCATCTTCCTCTGAATGGGATGAAGTTGGATTATTGAAGAATATGAAGCAGCCATCTTCACCAAACACTGTTACTGATAAGTGGGAAAGTAAATGTACTACGCCTAATGTGAGTGGTTGA 2112 0.3897 MLYCQVSRQDKHQLLYPKEPNLLYSHFLLKKHMASVYVFHFLLFSRLMLLLLASEDRYGNQVKCPPSFHCGHLGNISYPFTVTQSPHCGLFVISNCDNRLKSKDIQLENNGKWFWVIGIIHNPPTSPNITIQIRDYTLNNLMESRSCEAFSNNYTLPTNFTFGSIHISYSQILFKCNRSLHVKPPKDVHKYTNCSDYDLYYKPSLNPNDKSLSSLVACTMVKLPIKDVADAEDPFTFITSDIITEVRLSYECANCYYVKRGQCHLDNSQKFRCINATAKKGLRSKVKLAIGFGVGVLGILIIGLLLILILYKRKHATSGEDFHSRNSYSDSPSNLHLESGGVYFEVPIFSYKDLKEITNNFDHNKELGDGGFGTVYHGKLQDGREVAVKRLYEHNYRRVEQFMNEVQILTRLRHTNLVSLYGCTSKHSRELLLVYEYISNGTVACHLHGGLAKPGLLPWSIRMKIAIETAAALAYLHASDIIHRDVKTNNILLTKNFCVKVADFGLSRLFPTDVTHVSTAPQGTPGYVDPEYHQCYQLTSKSDVYSFGVVLIELISSKPAVDINRSREEINLSNLAIKKIQQSAISELVDPCLGFGTDNEVKRKIVSVAELAFQCLQRDKEFRPSMDEVLNELRKIEAVKDEQEVVAEADAPVDGVSLGIVHTHSSSSEWDEVGLLKNMKQPSSPNTVTDKWESKCTTPNVSG 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0442 703 MobiDBLite consensus disorder prediction 666 703 - -
Lal12g0442 703 Coils Coil 626 646 - -
Lal12g0442 703 ProSitePatterns Protein kinases ATP-binding region signature. 367 389 IPR017441 GO:0005524
Lal12g0442 703 SUPERFAMILY Protein kinase-like (PK-like) 346 645 IPR011009 -
Lal12g0442 703 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 33 703 IPR044652 -
Lal12g0442 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Lal12g0442 703 ProSiteProfiles Protein kinase domain profile. 361 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0442 703 MobiDBLite consensus disorder prediction 679 703 - -
Lal12g0442 703 Gene3D Transferase(Phosphotransferase) domain 1 438 650 - -
Lal12g0442 703 Gene3D Phosphorylase Kinase; domain 1 337 437 - -
Lal12g0442 703 Pfam Protein kinase domain 362 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0442 703 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 33 703 - -
Lal12g0442 703 SMART serkin_6 361 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0442 Lal-Chr12 3110087 3115576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0442 53 703 Receptor kinase-like Gene Family AT1G25390 48.480 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lal12g0442 Pkinase 1.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0442 - - gmx:100305407 805.053