Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0397 ATGGCAAGAATAATTGCTTTAGATCAAGATCGAGGAAGTACATGTAGAATTGTTGGAACATATGGTTATATGTCTCCTGAATATGCAATGCATGGACAATTTTCAGAAAAATCGGATGTATTTAGTTTTGGAGTCATACTTCTGGAAATAATTAGTGCAAAACGGAATGCACAAAAAGCAAGCTATGTTGAATGGGAAAACGATAAGGGTGGTGTGGTACGTCATGATCCTGATGCAAGGAAAAACATGTTGGGGAACGTGTTTGTTAAGGGATTCGAAATTGGGGATGAAGGTGCTGCTTTGGAATCATTACAATTTAGTTTAACAGCAATTGAGGTTGCTACAAAAAAGTTTTCAAATGAAAACAAAATAGGCAAAGGAGGATTTGGAGAGGTTTACAAGGAGTTAGAGAAAGAAAACAAGGATTTCTTAGAAGCATACTCCAGGAGTAAAGAGAGAACTTCGCAGACAGAGAAAACGCAAAGTATTCCCAACACAGTTTCAGATTCTTCCCATCAACGAGTTTAG 528 0.3731 MARIIALDQDRGSTCRIVGTYGYMSPEYAMHGQFSEKSDVFSFGVILLEIISAKRNAQKASYVEWENDKGGVVRHDPDARKNMLGNVFVKGFEIGDEGAALESLQFSLTAIEVATKKFSNENKIGKGGFGEVYKELEKENKDFLEAYSRSKERTSQTEKTQSIPNTVSDSSHQRV 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0397 175 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 94 134 - -
Lal12g0397 175 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 1 58 - -
Lal12g0397 175 MobiDBLite consensus disorder prediction 147 175 - -
Lal12g0397 175 Gene3D Transferase(Phosphotransferase) domain 1 1 88 - -
Lal12g0397 175 SUPERFAMILY Protein kinase-like (PK-like) 101 138 IPR011009 -
Lal12g0397 175 ProSiteProfiles Protein kinase domain profile. 1 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0397 175 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 58 - -
Lal12g0397 175 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 94 134 - -
Lal12g0397 175 Gene3D Phosphorylase Kinase; domain 1 97 175 - -
Lal12g0397 175 SUPERFAMILY Protein kinase-like (PK-like) 2 65 IPR011009 -
Lal12g0397 175 MobiDBLite consensus disorder prediction 157 175 - -
Lal12g0397 175 Pfam Protein tyrosine and serine/threonine kinase 18 56 IPR001245 GO:0004672|GO:0006468
Lal12g0397 175 Coils Coil 133 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0397 Lal-Chr12 2820354 2827582 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0397 1 57 Receptor kinase-like Gene Family AT3G45860 71.930 3.29e-22 90.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal12g0397 PK_Tyr_Ser-Thr 2.6e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0397 - - cam:101500396 104.375