Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0382 ATGGAGCCTGTTGAAGAATGGAGTTCCCTTAGTGGATTGTACACTGCTGATGAAGCTGACTTTATGAGCCAATTGCTTGGTAACTGCTTAGTTCCAGGGCAGTTATATGAAAATTTCAATATGGAAATTCCATCTGCATCATTGCATGGCCATGAATCAACAATAGTGAATGTTACAGGCCTTAATAAAAGTACACATTTTTCTGAAAATGCTGCCAATGCTAATTTTTTGCATAGTAGTAATATATTTCTCAGTACTAGTGGTAGCAGCTGCTACCTGAATGATCCAGTAAGCAACACTGGCTATGTGCCTATTGGAATTTCCTTTGTGGATGCCAAATCCAACCCTTATGGCTATCAAGGAAATGAGAACCAATATATAAATGAAAATATTGAAGACTTAGGTGTTGCTGACAAGAATTTGCAGGCTCACAAGGAATGTAAAAAAGCATTAGTTTCTGAACCAGCACAAGAGGATATAACCTGCAACCTGGAGAATTCAGGAAGAAGATCTAGGAGATCGGTCGAGGCCCACAAGAACAAGAGAAATGTTAAACCAAGGAAGAAACGGAAAACTTCTTCCACAAGCAACACTGAAGAGGATACAAATGCTGGTATTCAAGGGCTGAGCTTGAGCAATTGCTGCTCAGAGGATGATTCCAATGCTTCTCAGGAGATAAATGGAGAAGGGTCTTCAAGCTTGAGCTTGAGCCCGAAAGATTCGAAACATGTCAAGATAAATGGAAAATCAAGGTGTAGTAGAGGCTCTGCTACTGATCCACAGAGCATTTATGCAAGAGTGGATATCAGCACTATGCTTGAAGAAGCTGTGGAATATGTGAAGTTTTTACAGCTCCAAATTAAGCTTCTAAGCTCTAATGATCTCTGGATGTATGCTCCTATTGCTTACAATGGAATGAACATTGGACTAGACCTTAATCTTATCCCGACCAAACAATCATAG 963 0.3988 MEPVEEWSSLSGLYTADEADFMSQLLGNCLVPGQLYENFNMEIPSASLHGHESTIVNVTGLNKSTHFSENAANANFLHSSNIFLSTSGSSCYLNDPVSNTGYVPIGISFVDAKSNPYGYQGNENQYINENIEDLGVADKNLQAHKECKKALVSEPAQEDITCNLENSGRRSRRSVEAHKNKRNVKPRKKRKTSSTSNTEEDTNAGIQGLSLSNCCSEDDSNASQEINGEGSSSLSLSPKDSKHVKINGKSRCSRGSATDPQSIYARVDISTMLEEAVEYVKFLQLQIKLLSSNDLWMYAPIAYNGMNIGLDLNLIPTKQS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0382 320 MobiDBLite consensus disorder prediction 174 191 - -
Lal12g0382 320 MobiDBLite consensus disorder prediction 216 240 - -
Lal12g0382 320 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 5 316 - -
Lal12g0382 320 MobiDBLite consensus disorder prediction 162 204 - -
Lal12g0382 320 MobiDBLite consensus disorder prediction 216 257 - -
Lal12g0382 320 PANTHER TRANSCRIPTION FACTOR BHLH54 5 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0382 Lal-Chr12 2708326 2709974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0382 1 310 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 34.677 1.10e-39 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0382 - - gmx:100817334 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0382 12 2708326 2709974 Lal12g0382 12 2708326 2709974 ECH
Lal12g0382 12 2708326 2709974 Lal13g0371 13 2324727 2326241 LSH
Lal12g0382 12 2708326 2709974 Lal24g0292 24 2104263 2106222 LSH