Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0366 ATGATTACTCAGATCACCAAAACAAAGCTAGTAACATTCTTACTCAGCACCCTTATGCTCACAACCTCAGCCTCTGTATTCAACAACGTAACCTGCATAAGCAACAAAACCTTCACTCAAAACAGCACCTTTCATCTCAACCTCAACACCCTTCTCTCTAATCTTTCCTCAATTGTCCTCAATGGCAACAACATTAAATTCTTCAAAAGTTCCTCAGGTGAAAATAATCATTCAAACACTGTCTATGGCCTCTTCATGTGCCGTGGAGATGTGCCATTCCCACTATGCAGAGAATGTGTTGGTTTTGCAACACAAACTATAGCATCATCTTGTATAGATTCAAAAGAAGCTATTATTTGGTACAATGAATGTTTATTACGTTATTCTTATAGGTTTTTCTTTTCCATTATGGAAGAATGGCCTAGGCACCAGATAAATATACCACTAGGGGACCCTGTGATATTGCATAGTAATCAATTCTACACTGCTTTAAGATCTATTTTTAGTGAACTTCCAAATGAAGCAGCACTTTCTCTTAAAGGATCTTCTTCTTCTTCTCAACAATTTGCTGTGAAGCAAGCTAATGCATCTGCTACCACAACCCTATATGGTTTTGCTCAGTGCACGCCAGACTTGTCCACCACCAACTGCAGGCGCTGTGTCACGGATGCCACCGCGGAATTTTCGATGTCTTGTTGTGGAGGTAGCATAGGGGGAAGTGTTCTGTTTCCTAGTTGCACTGTTAGGTATGAAACATATCCATTCTATCAGCATTCAGGAACATCACTGGCAACAATTATCAATGGAGGAAGAAATAAAACAAAAGTGATTGAGATCATTGTTATCTTGGGTGCCATTTTGGTGATTCTTTTTGGCGTTGGCCATTCTTTCTTGCGGATAAAAGCGAGAAAGAGGCGTAAACGCAAGGACATTCTCAGAGAAAACTGTAGTGAGCTTGGGCTTGAAATTACTAGCTTGGAGTCCTTGGAATTTGATTTAGCTACAATTGAAGTAGCAACAAACAAGTTTTCTGATGAGAGGAGGATAGGTAAAGGTGGATACGGACAAGTCTACAAGGGAATTCTTCGGGGCGGAGAAGAGATAGCAGTGAAGAGACTCTCAAAAAATTCAGGGCAAGGAGGGGAGGAATTCAAAAATGAAGTGTTGTTAATAGCTAAACTTCAACATAGAAATTTGGTGAGATTAATAGGATTTTGCCAAGAACAAGATGAGAAAATACTTATCTACGAATATGTGCCTAACAAGAGTCTTGATCACTTCCTATTTGATTCCTTGAAGGAAAGACAATTAAGTTGGCCTGAGAGGTATAAAATCATAAAGGGAATTGCTAGAGGAATCCTATATTTGCATGAAGATTCCCGCCTCATGATTATACATCGTGATCTCAAACCAAGCAATGTTTTGATAGATATTAACATGAATCCCAAAATCTCTGATTTTGGCATGGCCAGGATGGTAGTAATCGACCAAATACAAGGAGCTACCAATAGAGTTGTTGGCACATTTGGATATATGTCTCCAGAGTATGCAATGCATGGACAATTTTCAGTGAAGTCTGATGTTTTCAGTTTTGGAGTCATGGTTCTTGAGATAATAAGTGGAAAGAAGAATTCTTGTTCTTTCGATTCACGTCGCGTTGATGACCTCTTGACTTATGCTTGGAATAAATGGAAGGATGAAATGCTATTACAATTGGTGGACCCAATTTTGCAAGAATCTTACACTCAAAATGAAGTTGAAAGGTGTGTCCAGATTGGTTTATTGTGTGTTCAAGAGCATCCAGATGATAGGCCAACAATGGGAATGGTTGCTTCATATCTAAACAATGATTCAGTTGAAATGCCAATTCCATTTGAACCAGCATTTTTCATGTATGGTAGAAGGAGAAGATATGGAGTTGAACATGAATCATCTTCAGGTCAAAACACCAATTATTCTTTATCCTGTTCTGTAAATGAGATATCTACCACTTATGTCTTCGCTCGTTAG 2010 0.3881 MITQITKTKLVTFLLSTLMLTTSASVFNNVTCISNKTFTQNSTFHLNLNTLLSNLSSIVLNGNNIKFFKSSSGENNHSNTVYGLFMCRGDVPFPLCRECVGFATQTIASSCIDSKEAIIWYNECLLRYSYRFFFSIMEEWPRHQINIPLGDPVILHSNQFYTALRSIFSELPNEAALSLKGSSSSSQQFAVKQANASATTTLYGFAQCTPDLSTTNCRRCVTDATAEFSMSCCGGSIGGSVLFPSCTVRYETYPFYQHSGTSLATIINGGRNKTKVIEIIVILGAILVILFGVGHSFLRIKARKRRKRKDILRENCSELGLEITSLESLEFDLATIEVATNKFSDERRIGKGGYGQVYKGILRGGEEIAVKRLSKNSGQGGEEFKNEVLLIAKLQHRNLVRLIGFCQEQDEKILIYEYVPNKSLDHFLFDSLKERQLSWPERYKIIKGIARGILYLHEDSRLMIIHRDLKPSNVLIDINMNPKISDFGMARMVVIDQIQGATNRVVGTFGYMSPEYAMHGQFSVKSDVFSFGVMVLEIISGKKNSCSFDSRRVDDLLTYAWNKWKDEMLLQLVDPILQESYTQNEVERCVQIGLLCVQEHPDDRPTMGMVASYLNNDSVEMPIPFEPAFFMYGRRRRYGVEHESSSGQNTNYSLSCSVNEISTTYVFAR 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0366 669 SMART serkin_6 343 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0366 669 SUPERFAMILY Protein kinase-like (PK-like) 329 636 IPR011009 -
Lal12g0366 669 Gene3D - 153 255 IPR038408 -
Lal12g0366 669 Gene3D - 25 133 IPR038408 -
Lal12g0366 669 ProSiteProfiles Gnk2-homologous domain profile. 142 255 IPR002902 -
Lal12g0366 669 Pfam Protein kinase domain 344 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0366 669 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Lal12g0366 669 ProSiteProfiles Gnk2-homologous domain profile. 26 133 IPR002902 -
Lal12g0366 669 CDD STKc_IRAK 349 616 - -
Lal12g0366 669 Gene3D Transferase(Phosphotransferase) domain 1 419 621 - -
Lal12g0366 669 Gene3D Phosphorylase Kinase; domain 1 304 418 - -
Lal12g0366 669 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 11 643 - -
Lal12g0366 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Lal12g0366 669 Pfam Salt stress response/antifungal 158 253 IPR002902 -
Lal12g0366 669 Pfam Salt stress response/antifungal 32 129 IPR002902 -
Lal12g0366 669 ProSiteProfiles Protein kinase domain profile. 343 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0366 669 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 11 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0366 Lal-Chr12 2612722 2617862 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0366 13 669 Receptor kinase-like Gene Family AT4G05200 44.575 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal12g0366 Pkinase 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0366 - - gmx:100791642 896.345