Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0363 ATGGGTTCCTTCTATTTGTTCATTCTACCTCTAACTTTCTTTTCTCTATATATTCATTGTTCTTCTTCTCCAATCATCCAAGCTTCTTTCCATCAAGATCCCAAAGCTTTCTATAACTGCACAAGGAACACAACTTTTGCTCTCAATGTTGATTACAATTCCAACATCCAAAAACTCATTCATAGTCTCTCCTCTAATGGCACTGGCAACCCCATAACCTACAACACTACAGTTACTAGTAAAAACACTGTAGACACTGTCTATGGCTTTGCCTTTTGTATGAGAGATGTCACTCCAAAAGGGTGCCAAGAGTGTGTGACAGAAGCAGCTAAACTCATATCATCGTTGTGTACAACAGCAAAAGAAGCCATAATTTGGTACCAAGTATGCATGGTGCGATACTCTGACCATTATTTCTTCTCCATGGTGGAAGAAAGTCCTAAAATTACCTTCATGAATGATCAAGATTATGTAGGCCAGGCTAGTCACTTCAGCAATATACTGTGGGATATGATGAATAACTTGAGAACTATGATAGCAAGTGCTTCTAATAAATATGCTTACAAGTCAGAGAACATCACTGAGAATGAAAAGCTATATGGTTCTGGTTGGTGTGCTCAATACCTATCCACAGAAAACTGCAGTTGGTGTCTCAGTGATGCCATTGCAGAAATTACAAATGCTTGCTGCAGAGGAAAATCAGGAGGAAACGTGATATACCCAAGCTGTGCTGTTAGATTTGAATTATATGCATTCCACAACAGCGATGTTGGTTGGCTGCAGAAACCACCGATGCCCAGTAGTACTCGCTCTTCGGCTCGACAAGGCTACAACTATATTCTACATAGAAGACAAAGAAAGAATGAAGATGATATTCTCAAAGAAAGCTTTGGGATTGATATTACCACTTTAGAGTCTTTGCGATATGACTTGGCCACAATTGAAGCTGCAACAAACAGATTTGCTACAGAAAACAGGATAGGCAAAGGTGGATTTGGAGAAGTCTATAAAGGTATTCTTTCAGATGGACAAGAAATAGCTGTGAAGAGGCTTACAAGAAGCTCTGGGCAAGGTGCAGTAGAGTTTAAAAATGAAGTCCTTGTTATAGCCAAGCTTCAACACAGAAATCTAGTGAGGTTACTAGGATTTTGTTTGGAAGCTGAAGAAAAAATACTCAACTATGAGTATGTACCAAACAAGAGCCTTGATTACTTTTTATTTGATCCAGAAAAGCGGAGATTGTTAACTTGGTCTAAACGTCACAAGATCATAACAGGAGTTGCTCGAGGAATTGTATATCTACACGAGGATTCTCGCCTCAAAATAATACACCGTGATCTGAAACCTAGTAATGTTTTGTTAGATAGCAATATGAATCCCAAAATCTCGGATTTTGGTATAGCCAGAATTGTGGCTGCAGATCAAATTGAGGAAAGTACGTGCCGAATTATTGGAACCTTTGGCTACATGTCTCCAGAATATGCAATGCATGGACAATTTTCTGTGAAATCAGATGTGTTTAGCTTTGGAGTCATGGTTCTTGAGATTATCAGTGGGAAGAGGAAAGGTTCTTCATCTGAATCAGAATGTGTTGAGGACATTCGAAAACATGCCTGGACAAAATGGACAGAGCAAACACCACTAGAACTACTGGATCCTAATATGGCAGGATCTTATTCCGATGAAGAAGTTATCAAATGCATTCAGATTGGTTTGTTATGTGTTCAGGATGATCCAGATGAAAGACCTACGATGGAAACTATTGTTTTCTACCTAAATAGTCCTTCTACCAACTTGCCATCCCCACATGGACTCACACATTTCAAGGGCAGTAGTAAAGATGATAACTTGACCAAAAAGAAGTTTGATAATAGTGTTTCCATCAATGAGATTACTCTTACAAAATTCTTACCTCGTTAA 1920 0.388 MGSFYLFILPLTFFSLYIHCSSSPIIQASFHQDPKAFYNCTRNTTFALNVDYNSNIQKLIHSLSSNGTGNPITYNTTVTSKNTVDTVYGFAFCMRDVTPKGCQECVTEAAKLISSLCTTAKEAIIWYQVCMVRYSDHYFFSMVEESPKITFMNDQDYVGQASHFSNILWDMMNNLRTMIASASNKYAYKSENITENEKLYGSGWCAQYLSTENCSWCLSDAIAEITNACCRGKSGGNVIYPSCAVRFELYAFHNSDVGWLQKPPMPSSTRSSARQGYNYILHRRQRKNEDDILKESFGIDITTLESLRYDLATIEAATNRFATENRIGKGGFGEVYKGILSDGQEIAVKRLTRSSGQGAVEFKNEVLVIAKLQHRNLVRLLGFCLEAEEKILNYEYVPNKSLDYFLFDPEKRRLLTWSKRHKIITGVARGIVYLHEDSRLKIIHRDLKPSNVLLDSNMNPKISDFGIARIVAADQIEESTCRIIGTFGYMSPEYAMHGQFSVKSDVFSFGVMVLEIISGKRKGSSSESECVEDIRKHAWTKWTEQTPLELLDPNMAGSYSDEEVIKCIQIGLLCVQDDPDERPTMETIVFYLNSPSTNLPSPHGLTHFKGSSKDDNLTKKKFDNSVSINEITLTKFLPR 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0363 639 ProSiteProfiles Gnk2-homologous domain profile. 34 139 IPR002902 -
Lal12g0363 639 SUPERFAMILY Protein kinase-like (PK-like) 306 598 IPR011009 -
Lal12g0363 639 Gene3D Transferase(Phosphotransferase) domain 1 397 600 - -
Lal12g0363 639 ProSiteProfiles Protein kinase domain profile. 321 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0363 639 Pfam Salt stress response/antifungal 156 250 IPR002902 -
Lal12g0363 639 Pfam Salt stress response/antifungal 40 136 IPR002902 -
Lal12g0363 639 CDD STKc_IRAK 327 593 - -
Lal12g0363 639 Pfam Protein kinase domain 322 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0363 639 SMART serkin_6 321 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0363 639 Gene3D Phosphorylase Kinase; domain 1 282 396 - -
Lal12g0363 639 Gene3D - 148 252 IPR038408 -
Lal12g0363 639 Gene3D - 34 139 IPR038408 -
Lal12g0363 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Lal12g0363 639 ProSitePatterns Protein kinases ATP-binding region signature. 327 349 IPR017441 GO:0005524
Lal12g0363 639 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 10 278 - -
Lal12g0363 639 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 280 639 - -
Lal12g0363 639 ProSiteProfiles Gnk2-homologous domain profile. 145 252 IPR002902 -
Lal12g0363 639 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 10 278 - -
Lal12g0363 639 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 280 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0363 Lal-Chr12 2601485 2604230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0363 11 639 Receptor kinase-like Gene Family AT4G05200 41.630 1.40e-176 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lal12g0363 Pkinase 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0363 - - gmx:100793219 888.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0363 12 2601485 2604230 Lal12g0363 12 2601485 2604230 ECH