Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0359 ATGTCTAAAACCGGAGGCATGGCTGATTTGGTAATTACAAACAGAGTTGAAGGCAACGAGAAGATAATGGAAGAAGCTCCTAATCCTTCTTCTGATGATCAACCTCAACAACAACAACAAGAACAAGAAGACCCAAACCAACCAGCCAAAAGAAAAAAGAGATACCACCGTCATTCTGAAAAACAAATCCAACAAATGGAAGAGTTCTTCAAGGAGTGCCCTCACCCAAATGAAAGTCAAAGGAAAGAGTTAAGCATACACCTCAAGTTAGACCCTTCTCAAGTAAAGTTTTGGTTCCAGAACAAACGGACACAGCTTAAGAGTCAAGTTGAACACTATAACAATAATCGTTTGAATGAAGAGATTGAGAACCTTCGTGCTGAGCTCGAAAGGTGTCATGCGGCACTAAAGAAAGTAGCATGCCCTAGTTGTGGAGGGCCCTCTCGTTATGGTGAAATGTCATTTGATGAACATCATTTGAGGATGGAGAATGCTCAGTTAAAACAAGAGGTTACAAGATTGTCAAGAATGACGAGCAATCATGTTGGAAATGTTGCGTGTTCCTCCTACACAAACGTGTCATCAACACAAAATCACATGCCCTCACATGATGTAGGAATTGGGAGCTATGGAGTAATACCAAGCATGGTTGGGGAAATGTATGGTACCAATGGAAGTGGTAGTTACCTTCCTACCTCACTCCAAGTTGCTCCTGATCCTAAAAAGCTGATGATTGTGAAGCTCGTTGATGCAGCAATGGAGGAACTCACAAAGTTGGCCATGGTTGGACACCCCTTATGGCTCCCTCAAAACAACCAATTTAGTACTGAGATTTTAAATGAGGATGAATACTTTAGGATTTTCTCTAATGGGTTAGGTCCAAAACTCTTGGGATTCAAGTCTGAAGCTTCAAGGGATTCTGTGGTGATTATAAAAAATAATATCAACCTCGTTGAAATCTTTATGGATGTGAAACAATGGTCAAAGGTGTTTTGTGATATTGTTTCAAGAGCTATGACACATGAAGTTCTGTCACCAGGAATGACAGGAAACTATAACGGAGTTTTGCAAGTGATGTCAGCTGAGTTTCAGGTTCCTTCACCAATGGTTCCTACTCGTAGATCTTATTTTGCAAGGTATTGTAAGCAACACCAAGATGGTTCATGGGTTCTGGTGGATGTTTCCTTAGATGATATTCGACCTAATGCAATCTCAAATTGCCGAAGAAGGCCCTCTGGTTGTTTGATCCAAGAGTTGCCAAATGGTTACTCAAAGTTAATGTGGATTGAACATGTGGAAGTAGATGAGAGAGCTAGTTATTATAATCTTTATAACCACTTTGTTCATTCTGGCTTTGCCTTTGGAGCTAAAAAATGGGTTGCTTCATTAGATAGACATTGCCAACGCCTTGCTCTTACCATGCTCCCAACAATGCTGGACCATGGTGAGGGAAAGCAATGTATAGTGAAGTTGGCAGATAGGATGAAATGGAGCTTCTTTGGCGGTGTGGGTTCTTCTACAGCAGATATTTGGAAAACAATATCATCACCTTGTGATGATGTAAAGATCATGCGCAGAACAAGTATGAATGATCCTGGGAGGCCTAGTGGCTTAGTTCTCAATATTGCAACCTCTTTCCGCCTTCAAGTTCCTCCTATAAGGGTTTTTACTTTTCTTCGAGATGGAAAATTCAGAAGCCAGTGGGATGTTCTCTGCACATCAGCTTTGGTTCAAGAAAAGGAGCACATAGCAAGTGGTAGAGATTCAGGAAATTGTATCTCTCTTATTCAAGTCAATCAACTGCAGAATGATAATCAGAATATGTATATACTTCAAGAAAGTTTCACTGATGTTACAGGCTCATATGTAATCTATGCACCTATTGATGTTGGTCCTATGAATGAAGTTTTAAGTGGGGGTGACCCAGATTTTCTTGGCATGTTGCCCTCAGGTTTTGCTATAATTCCTGATGGGCCAATTTTGTTACCATCACCTCATGGAGGTTCCATATTTAACGCTGGTCCTAGAGGTTCCCTATTAACTGTGGCATTTCAAGTACTAGTTCATAATAAAACCACAGGGAAATTCTCTCCTAACTCAGTGGCCAGCGTGAACGATTTTCTTAAGTTCACAATGAAAAAGATAAAAGATGCAGTCATGGATGACAGCAACAAGCACTTACTCGACATTCAAATAGTAAGCAAATCAACCACTCGGTACTCACTTAGATTATGTAACATGGCAGTTTAG 2250 0.4049 MSKTGGMADLVITNRVEGNEKIMEEAPNPSSDDQPQQQQQEQEDPNQPAKRKKRYHRHSEKQIQQMEEFFKECPHPNESQRKELSIHLKLDPSQVKFWFQNKRTQLKSQVEHYNNNRLNEEIENLRAELERCHAALKKVACPSCGGPSRYGEMSFDEHHLRMENAQLKQEVTRLSRMTSNHVGNVACSSYTNVSSTQNHMPSHDVGIGSYGVIPSMVGEMYGTNGSGSYLPTSLQVAPDPKKLMIVKLVDAAMEELTKLAMVGHPLWLPQNNQFSTEILNEDEYFRIFSNGLGPKLLGFKSEASRDSVVIIKNNINLVEIFMDVKQWSKVFCDIVSRAMTHEVLSPGMTGNYNGVLQVMSAEFQVPSPMVPTRRSYFARYCKQHQDGSWVLVDVSLDDIRPNAISNCRRRPSGCLIQELPNGYSKLMWIEHVEVDERASYYNLYNHFVHSGFAFGAKKWVASLDRHCQRLALTMLPTMLDHGEGKQCIVKLADRMKWSFFGGVGSSTADIWKTISSPCDDVKIMRRTSMNDPGRPSGLVLNIATSFRLQVPPIRVFTFLRDGKFRSQWDVLCTSALVQEKEHIASGRDSGNCISLIQVNQLQNDNQNMYILQESFTDVTGSYVIYAPIDVGPMNEVLSGGDPDFLGMLPSGFAIIPDGPILLPSPHGGSIFNAGPRGSLLTVAFQVLVHNKTTGKFSPNSVASVNDFLKFTMKKIKDAVMDDSNKHLLDIQIVSKSTTRYSLRLCNMAV 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0359 749 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1-LIKE 35 721 - -
Lal12g0359 749 CDD START_ArGLABRA2_like 242 468 - -
Lal12g0359 749 MobiDBLite consensus disorder prediction 29 44 - -
Lal12g0359 749 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 35 721 IPR042160 -
Lal12g0359 749 Pfam START domain 250 469 IPR002913 GO:0008289
Lal12g0359 749 Gene3D - 35 122 - -
Lal12g0359 749 Gene3D - 306 469 IPR023393 -
Lal12g0359 749 CDD homeodomain 51 109 IPR001356 GO:0003677
Lal12g0359 749 SMART START_1 247 469 IPR002913 GO:0008289
Lal12g0359 749 ProSiteProfiles START domain profile. 238 472 IPR002913 GO:0008289
Lal12g0359 749 SUPERFAMILY Bet v1-like 242 470 - -
Lal12g0359 749 SUPERFAMILY Bet v1-like 483 659 - -
Lal12g0359 749 Pfam Homeodomain 52 107 IPR001356 GO:0003677
Lal12g0359 749 ProSiteProfiles 'Homeobox' domain profile. 49 109 IPR001356 GO:0003677
Lal12g0359 749 SMART HOX_1 50 113 IPR001356 GO:0003677
Lal12g0359 749 ProSitePatterns 'Homeobox' domain signature. 84 107 IPR017970 GO:0000981|GO:0006355
Lal12g0359 749 SUPERFAMILY Homeodomain-like 45 114 IPR009057 -
Lal12g0359 749 Coils Coil 103 139 - -
Lal12g0359 749 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0359 Lal-Chr12 2576238 2580170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0359 40 722 Homeobox Transcription Factor Family AT4G04890 55.050 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lal12g0359 START 1.3e-46 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0359 K09338 - fve:101311833 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1635 23 16107448 16114245 Lal12g0359 12 2576238 2580170 PCT
Lal12g0359 12 2576238 2580170 Lal23g1635 23 16107448 16114245 PCT