Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0353 ATGACGATGACGATGGTAGAGAGCATTGTGCTTCTCTTTGTTCTCCTTATGCTTCTTCTTCTCATCATCCTTTTCTTCTTCTCCTTCAAACCATGGCGCTTCTTTTTCTCTTCTTCCCCTTCCCGCTCCTTCAAGGCTGATGAGCTGGAAAGACCCCTTGTTGTAGAGGACATAAATGTTTCATGTAATCAAAACACTGAGTTGCCTAGGGATTATGACCTTGAGGGTGCTTGCTATCCATGTGACGGTCATTTTCGCTCACCAAGAACCCATGGACTTGTTAATAAGCAAAGGCTTCCTGCTGTTTCTCTTTCTTCTAATGTGCTTCAAGGAACTCCCGCCACCAGTGATAGTTTGGTTATAGATATAACTTCTGATCCTTTAGAAGATGTTGGTCAAACACTTAAGCTTTCCTCAGCCAAGTTAGCTGAAATTCAAAAGCATACTGGAGCAAATTTTGGAAATGCTAGACCACGTGCCTTTGTGCAAAAAGACATATCTGATCAAAGAAGTTGCCTCACTCTGGAGGTTATCGATGGTCCTTCTCTTGGACTTCATTATTCCGTACTGTCATCAAGTCCCTCTCGCCTACCACTGACACTGGGAAGAGTTTCTCCAAGTGATTTGTTGATAAAAGATTTAGAAGTGTCCGGAAAGCACGCACTAATAAAGTGGAATTTGGATAGAATGAAGTGGGAGTTGGTAGATATGGGTAGCCTAAATGGGACACTTTTGAATTCTCAGCCAATCAACAATACAAACACTGGAAGCAGGAATTGGGGTAACCCGACAGATCTTGCTAATGGAGATATCATAACACTTGGAACAACATCAAGAATAGTTGTTCATATTACTACACAAAATCAGCAGAACATTCCCTTTGGAGTGGGTATGGCATCAGATCCCATGGCTTTACGTCGAGGAGGAAAAAAGCTGCCTATGGAAGATGTTTGCTATTACCAATGGCCTTTACCTGGGCTGGATCAGTTTGGACTGTTTGGCATTTGTGATGGGCATGGTGGAGATGGGGCTGCCAAATCTGCTAGCAAACTTTTTCCAGAGATAATTACTACTATATTATCAAATTCATTAACAAGAGAGAGGGTTTTATCACTTCGTGATGCTTCAGATATTCTTCGAGGCGCATTTTCTCAGGCAGAAGCATGCATGAATCATTATTATGAGGGGTGCACAGCAACAGTGCTTCTGGTGTGGGCTGATGAAAATGAAAATATTTTTGCGCAATGCGCAAATGTTGGAGACTCCAGCTGTGTCATGAGTGTTGATGGCAACCAAATCAAGATGACAGAAGATCATAAGATAACAAGTAATTCTGAAAGGCTCAGAATTGCAGAGATGGGTGAACCATTGAAAGATGGTGAAACACGTTTATATGGTATAAATCTTGCAAGGATGCTTGGGGACAAATTCCTGAAACAGCAGGATTCACGGTTCAGTTCAGAGCCTTATATAAGTGAAGTCGTGCATATTGATCAAGCAAGGACAGCCTTTGCCATTCTAGCTAGTGATGGGTTATGGGATGTCATCAGCATGAAGAAGGCAAATCAGCTAGTGCTTCAGATGAAGGAGCAACTCTCAGTAGATAGAGAAAATTCAGCAGAGAAGATTGCTAATTTTTTGTTGAGTGAGGCTAAAACACTGAGAACAAAGGATAATACCTCTGTCATCTTTTTAGATTTTGATAACTCCAGCAGATTCTATTGTAAAGTTGAGTCTTAG 1740 0.4149 MTMTMVESIVLLFVLLMLLLLIILFFFSFKPWRFFFSSSPSRSFKADELERPLVVEDINVSCNQNTELPRDYDLEGACYPCDGHFRSPRTHGLVNKQRLPAVSLSSNVLQGTPATSDSLVIDITSDPLEDVGQTLKLSSAKLAEIQKHTGANFGNARPRAFVQKDISDQRSCLTLEVIDGPSLGLHYSVLSSSPSRLPLTLGRVSPSDLLIKDLEVSGKHALIKWNLDRMKWELVDMGSLNGTLLNSQPINNTNTGSRNWGNPTDLANGDIITLGTTSRIVVHITTQNQQNIPFGVGMASDPMALRRGGKKLPMEDVCYYQWPLPGLDQFGLFGICDGHGGDGAAKSASKLFPEIITTILSNSLTRERVLSLRDASDILRGAFSQAEACMNHYYEGCTATVLLVWADENENIFAQCANVGDSSCVMSVDGNQIKMTEDHKITSNSERLRIAEMGEPLKDGETRLYGINLARMLGDKFLKQQDSRFSSEPYISEVVHIDQARTAFAILASDGLWDVISMKKANQLVLQMKEQLSVDRENSAEKIANFLLSEAKTLRTKDNTSVIFLDFDNSSRFYCKVES 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0353 579 Gene3D - 303 575 IPR036457 -
Lal12g0353 579 SMART FHA_2 198 250 IPR000253 GO:0005515
Lal12g0353 579 CDD PP2Cc 307 567 IPR001932 -
Lal12g0353 579 Pfam FHA domain 200 275 IPR000253 GO:0005515
Lal12g0353 579 Gene3D - 167 302 - -
Lal12g0353 579 CDD FHA 173 286 IPR000253 GO:0005515
Lal12g0353 579 SUPERFAMILY SMAD/FHA domain 171 283 IPR008984 GO:0005515
Lal12g0353 579 Pfam Protein phosphatase 2C 306 560 IPR001932 -
Lal12g0353 579 ProSiteProfiles PPM-type phosphatase domain profile. 295 567 IPR001932 -
Lal12g0353 579 PANTHER PROTEIN PHOSPHATASE 2C 36 578 IPR015655 GO:0004722|GO:0006470
Lal12g0353 579 SMART PP2C_4 289 565 IPR001932 -
Lal12g0353 579 ProSitePatterns PPM-type phosphatase domain signature. 332 340 IPR000222 GO:0043169
Lal12g0353 579 ProSiteProfiles Forkhead-associated (FHA) domain profile. 199 250 IPR000253 GO:0005515
Lal12g0353 579 SUPERFAMILY PP2C-like 286 569 IPR036457 -
Lal12g0353 579 PANTHER PROTEIN PHOSPHATASE 2C 70 36 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0353 Lal-Chr12 2530024 2535821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0353 3 570 PP2C-type Phosphatase Gene Family AT5G19280 56.355 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0353 K01090 - gmx:100170642 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0353 12 2530024 2535821 Lal12g0353 12 2530024 2535821 ECH