Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0351 ATGGCTTCGTTAACATCACCCACCACCACCACGAAAGAGATTGTTGTAGATATTTCTCCCTATTTCCGAGTCTTCAATGATGGCACCGTTGAAAGACCCTTACAATCAGCAATAGAACCAGTGCCACCTTTGCTTCATGACCCTCATTCTGGAATCTCTTCCAAAGATGTTGTCATTTCATGCAACCCCACAATCTCTGCTCGCCTCTACCTTCCTGATAAGAATTGTGGCATTACCATCATTCTAGATCTTTCTAGAAAATTGCAGCATGTTTTAACACTTCCAAAAATCACCAACCAAACTGAAAAAGTTCCCATCTTGGTCTACTTTCATGGTGGTGCATTCTTCACTGGTTCTGCATTCTGCCAATTATACCATCACCACTTCAACAACTTTGTTTCACAAGTAAATGTGATGGTTGTTTCCGTAGAGTATAGGCTTGCCCCAGAGAACCCTCTTCCTGCATGTTATGATGATTGTTGGGATGCTCTCAAATGGGTCTCTTCCCATTATGACAAAAGCATCACAAACAAAGAACCATGGTTGATTGAGCATGGTGATTTCAAGAAAGTGTTCATAGGTGGTGATAGTGCTGGGGGTAACATTGTGCATAACATTGCCATGCGTGCTGGGACTGAGGCTTTACCTTGTGGTGTTGAAATATTAGGAGCATTTCTGAGTCACCCTTTTTTCTGTGGTTCACAACCAATTGGATCAGAACCCTTAGGTCATGGTCATATGGCTTGGAACTTGGTGTATCCAAATGCACCAGGTGGGGTTGATAATCCATTCATCAACCCTTTGGCTGAAGGAGCACCTAGATTGAGTGGACTTGGGTGTTCTAGAATTCTTGTTTGTGTTGCTGGTAAGGATCAATTGAGAGATAGAGGGATATTGTACTATGAAGCTGTGAAAAAGAGTGGGTGGAAAGGTGAAGTGGAACTGTTTGAAGAGAAAGAGGAGGATCATTGTACCAATTCTCAGATTAACATTCTACACGAGCTTTGCGTTGTTTCATCAGATCTGTTGCATTTCAAGCTTAAAGTCAAGATCTTTGTTGGTTTCATTGCAATGGAGTTGGATTCACAGCAGAGACCATTTTCAATCAAATTGTGGCCTCCTAGTCAGAACACCAGACAAACACTTGTGGAGAGAATGACCAACAATCTGACAACTAAATCTATTTTCACACAGAAGTATGGAACTTTGGACAAGGAAGAGGCTGAAGAGAATGCAAAAAGAATTGAAGATGCTTCTTTTGCCACAGCAAACTTATTCTATGAGAATGAGCCAGATGGTGATGGGGGTTCTGCAGTACAGCTTTATGCCAAAGAATGTAGTAAGCTCCTCCTAGAAGTTCTTAAAAGAGGACCTAGTAAAAAGGATAACAGAGAATTGTCTGTGGCATCTGATAATACCACTGCACTTAATGAAAATGTTTTTGATATATCTAAAGGTCAAAGGGCCTTCATTGAAGAAAACGAGGCACAGGAACTTTTAAAGCCATTAAAGGAGCCAGGAAATCCTGTCACCAAGATATGCTTCAGCAACAGAAGTTTTGGAGTAGGAGCAGCACTAGTTGCCCAGACCATTCTCGTTTCCCTTAAGGACCAGCTGAAAGAAGTTGATCTATCAGATTTTATTGCTGGAAGACCAGAAGCAGAAGCTTTAAATGTCATGAATATATTCTCAACTGCTCTAGAGGGTAGTGCCTTGAGGTCTTTAAACCTCTCTGACAATGCTTTAGGTGAGAAAGGTGTTAGAGCATTTGGAGCACTCTTGAAATCACAGAATTGCTTGGAGGAGCTTTATTTGATGAATGATGGAATCTCGAAGGAAGCTGCTAAAGCAGTTAGTGAGTTGATTCCTTCTACAGAAAAGCTCAAAGTTCTCCATTTTCATAACAACATGACTGGGGATGAAGGGGCACTAGCTTTAGCAGAGGTTGTCGAGCGTTCGCCTTTATTGGAGGATTTTCGTTGTTCCTCCACGAGGATAGGCGCTGAAGGTGGAGTAGCCTTGTCCAAGGCTTTAGGGCATTGTACCCATCTGAAGAAGCTTGATTTACGAGACAACATGTTTGGTGTAGAGGGTGGGGTTTCTCTGAGTAAAGCTCTTACCAATCATGCAGAGTTAAGAGAGATATACCTGAGCTACCTGAACTTAGAAGATGAAGGGGCAATCGCTATAGTCAATGCTCTTAAGGATTCAGCTCCTCACCTTGAAGTTCTGGAGTTGAGTGGAAATGACATTACAGCTGATTCTGTTCCTGCAATTGCCGCCTGCCTAGCTGCAAAGCAATTTCTTTCCAAGTTGATCCTCGCTGAGAATGAACTCAAAGATGAAGGCACCATTCAAGTAAGCAAGGTTCTCGAAGGCCATATTCAGTTAAAGGAAATTGATCTAAGTTCCAACCAAATAACTTGGTCTGGGGTTCAGCAGTTGGCTCTGGCTGTGGTACAAAAGGCTGATTTCAAAATTCTGAATATTAATGGGAACTTCATTTCCAATGAGGGCATTGATGAGTTGATGGATATATTTAAAAACTCTCCGGACAGGCTTGGTCTGTTAGATGATAATGATCCTGATGGAAAAGACGGTGACGACGATGATGAAGAAGGTAGTGAGGATGAACTGGAGTCCAAAATGAAGAACCTTGCAGTTGATGATTGA 2673 0.4198 MASLTSPTTTTKEIVVDISPYFRVFNDGTVERPLQSAIEPVPPLLHDPHSGISSKDVVISCNPTISARLYLPDKNCGITIILDLSRKLQHVLTLPKITNQTEKVPILVYFHGGAFFTGSAFCQLYHHHFNNFVSQVNVMVVSVEYRLAPENPLPACYDDCWDALKWVSSHYDKSITNKEPWLIEHGDFKKVFIGGDSAGGNIVHNIAMRAGTEALPCGVEILGAFLSHPFFCGSQPIGSEPLGHGHMAWNLVYPNAPGGVDNPFINPLAEGAPRLSGLGCSRILVCVAGKDQLRDRGILYYEAVKKSGWKGEVELFEEKEEDHCTNSQINILHELCVVSSDLLHFKLKVKIFVGFIAMELDSQQRPFSIKLWPPSQNTRQTLVERMTNNLTTKSIFTQKYGTLDKEEAEENAKRIEDASFATANLFYENEPDGDGGSAVQLYAKECSKLLLEVLKRGPSKKDNRELSVASDNTTALNENVFDISKGQRAFIEENEAQELLKPLKEPGNPVTKICFSNRSFGVGAALVAQTILVSLKDQLKEVDLSDFIAGRPEAEALNVMNIFSTALEGSALRSLNLSDNALGEKGVRAFGALLKSQNCLEELYLMNDGISKEAAKAVSELIPSTEKLKVLHFHNNMTGDEGALALAEVVERSPLLEDFRCSSTRIGAEGGVALSKALGHCTHLKKLDLRDNMFGVEGGVSLSKALTNHAELREIYLSYLNLEDEGAIAIVNALKDSAPHLEVLELSGNDITADSVPAIAACLAAKQFLSKLILAENELKDEGTIQVSKVLEGHIQLKEIDLSSNQITWSGVQQLALAVVQKADFKILNINGNFISNEGIDELMDIFKNSPDRLGLLDDNDPDGKDGDDDDEEGSEDELESKMKNLAVDD 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0351 890 PANTHER RAN GTPASE-ACTIVATING PROTEIN 1 358 889 IPR045203 GO:0005096
Lal12g0351 890 MobiDBLite consensus disorder prediction 862 877 - -
Lal12g0351 890 SUPERFAMILY RNI-like 490 868 - -
Lal12g0351 890 Gene3D alpha/beta hydrolase 8 332 IPR029058 -
Lal12g0351 890 SUPERFAMILY alpha/beta-Hydrolases 2 325 IPR029058 -
Lal12g0351 890 Gene3D Ribonuclease Inhibitor 484 767 IPR032675 -
Lal12g0351 890 PANTHER RAN GTPASE-ACTIVATING PROTEIN 2 358 889 - -
Lal12g0351 890 Pfam alpha/beta hydrolase fold 107 324 IPR013094 GO:0016787
Lal12g0351 890 Gene3D WPP domain 368 466 IPR038214 -
Lal12g0351 890 MobiDBLite consensus disorder prediction 854 890 - -
Lal12g0351 890 Pfam WPP domain 368 462 IPR025265 -
Lal12g0351 890 SMART LRR_RI_2 625 652 - -
Lal12g0351 890 SMART LRR_RI_2 681 708 - -
Lal12g0351 890 SMART LRR_RI_2 766 793 - -
Lal12g0351 890 SMART LRR_RI_2 738 765 - -
Lal12g0351 890 SMART LRR_RI_2 569 596 - -
Lal12g0351 890 SMART LRR_RI_2 653 680 - -
Lal12g0351 890 SMART LRR_RI_2 597 624 - -
Lal12g0351 890 SMART LRR_RI_2 822 849 - -
Lal12g0351 890 SMART LRR_RI_2 794 821 - -
Lal12g0351 890 SMART LRR_RI_2 709 736 - -
Lal12g0351 890 Pfam Leucine Rich repeat 572 590 IPR001611 GO:0005515
Lal12g0351 890 Pfam Leucine Rich repeat 739 759 IPR001611 GO:0005515
Lal12g0351 890 Pfam Leucine Rich repeat 797 816 IPR001611 GO:0005515
Lal12g0351 890 Pfam Leucine Rich repeat 680 703 IPR001611 GO:0005515
Lal12g0351 890 Gene3D Ribonuclease Inhibitor 773 863 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0351 Lal-Chr12 2515220 2524379 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0351 13 324 Carbohydrate Esterase AT1G19190 39.557 5.61e-68 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0351 K14319 - gmx:100785942 828.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0351 12 2515220 2524379 Lal12g0351 12 2515220 2524379 ECH