Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0346 ATGGATAAGTCCTTGAGCTTCTCATCAAAAAATAATGGCACCCCAAAACTTAGACGCAAACTCTCTGAACAATTAAGCTGGGAAATAGATAATGGTGATATTCTCATCCACAACCATCATCACAACCATAATCTCCCAAATGTTCTAGAGGAAGTTGATCATTTTCTTCACATTCATACCTCAAATGATCATAAAGTAGTTCCAGAATGTGTCATTTTATTGACAAAATTGTTGGATTCTATGATCGATAAATACAATCGTAGTAGCAAATTTGGACAAGACCCAAAAGGTGATAAATCCTTTCTAGACATTGTAGATCGAATTTCCAAAGTTTGTAACATTTTGAATACTAGCACTGCATTGGATGAAACTAGTTCAATTCTAGAAAAAGCAATGCGTTTTTTAGAGAAAGATCTTATCTCTATCTTGCAACCTCGAAAATCTACAAATACTAGTATTAGCAACAACAACAATACCTATGAGTTTCAAATCAAAACACCAAAGAAAACATTTCCAAGGAAAACGTTCTCTTTTGGTTCCCTTAACCTGCATGACTCTAATCTCGTCGAGAATGGGTCCCCTATGGAAAACCCGTATGAGGATGAGGAAGACGAAGAATTCCCATCATTTTCTCAAGAAAAAGTTTCGATCTTGAACAAGATCGCTACCGCAATGATCAACGCCGGATATGATGCAGAGTTTTGCATGGTTTTTGCCAATTTCAGAAGAAATGCTTTCAAAACAGCATTGCAAAGGTTCGGTTATGATATTATGAACATGGAAGATATTCACAAAATGCAATGGGAATTATTGGAAGGACAAATTACAACATGGAACAGTGTGGTAAAACATTGCACCACAGTGCTCTTCAATGCTGAAAGGAAACTCTATGATTCTCTGTTCTCAAATCAAAACACAATAATATCTCACAAGCTTTTTAGCGATCTCGTGCGCGATGTCATAATTCAATTTCTCAATTTTGCACAAGGGGTTGTTTTACAAAAGCCATCAGCAGAAAAACTATTCAAATTCTTAGACATGTATGAGACACTTAGAGACATGGAGCCTGTGATTAAATTCGATGATTCATATGAAGAACAATGTGTGAAGGAGCTAGAATATGAAACTGCTACAACAAAAAGTAGAATAGTAGAAGTTGCTGTGGCAATGTTCTTTTATTTGGAAAACTCAATTAAGAGTGATAATCAAAGGATTGCAGTTCCGAATGGCGCAATTCACCCGTTGTGTCGATATGTCATGAATTATGTTAAATATGCATGTGAGTATAGAGATACTCTTGAGCAAATGTTTCAGGTTCATCAATGCATTGATGCTAATAAGGAGAATCATAAATTCAACATGAATGACCAAAGCAAAATGGAAGATGGAACACCTAACACTTCAGCTTTCGCGGTTCAGTTAATGACAATCATGGACTTGTTGGATGAAAACATTGAAAGGAAGTCTAGGTTGTATAGGGACCAAGCATTAAGGTATATTTTTCTAATGAACAATGGGAGATACATAGTACAAAAGATCAAAGGGTGTGTGGAACTTCATGAATCAATGGGTGATAATTGGTGTAGAAAGAAGCAATCTAGTTTGAGATTGTACCATAAGAGTTATCAAAGAGAGACATGGACTAAGGTGATACAATGCCTTAACCCAGAGAATATTCAAGTGGGTGGGAACAACAAAGTTTCAAGACAAGTTCTTAAGGAAAGGTTTAAGTGTTTTAATACAATGTTTGAAGAGATACACAAGACACAAAGTACTTGGGTTGTTAGTGATGAACAACTTCAATCAGAGTTAAGAGTTTCAATAACTGCTTTGGTTATACCAGCATATAGATCCTTTTTTGGAAGATTCAAAAAGGGGGTTGACAAGTATATTAAGTATCATCCTGAGGATATTGAAGCTTTGATTGAAGATTTATTTGGTGGAAATTCTACATCCATGTCTAGAAGGAGAACATGA 1977 0.3561 MDKSLSFSSKNNGTPKLRRKLSEQLSWEIDNGDILIHNHHHNHNLPNVLEEVDHFLHIHTSNDHKVVPECVILLTKLLDSMIDKYNRSSKFGQDPKGDKSFLDIVDRISKVCNILNTSTALDETSSILEKAMRFLEKDLISILQPRKSTNTSISNNNNTYEFQIKTPKKTFPRKTFSFGSLNLHDSNLVENGSPMENPYEDEEDEEFPSFSQEKVSILNKIATAMINAGYDAEFCMVFANFRRNAFKTALQRFGYDIMNMEDIHKMQWELLEGQITTWNSVVKHCTTVLFNAERKLYDSLFSNQNTIISHKLFSDLVRDVIIQFLNFAQGVVLQKPSAEKLFKFLDMYETLRDMEPVIKFDDSYEEQCVKELEYETATTKSRIVEVAVAMFFYLENSIKSDNQRIAVPNGAIHPLCRYVMNYVKYACEYRDTLEQMFQVHQCIDANKENHKFNMNDQSKMEDGTPNTSAFAVQLMTIMDLLDENIERKSRLYRDQALRYIFLMNNGRYIVQKIKGCVELHESMGDNWCRKKQSSLRLYHKSYQRETWTKVIQCLNPENIQVGGNNKVSRQVLKERFKCFNTMFEEIHKTQSTWVVSDEQLQSELRVSITALVIPAYRSFFGRFKKGVDKYIKYHPEDIEALIEDLFGGNSTSMSRRRT 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0346 658 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 36 649 - -
Lal12g0346 658 Pfam Exo70 exocyst complex subunit 277 644 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lal12g0346 658 Gene3D Exocyst complex component Exo70 87 656 - -
Lal12g0346 658 SUPERFAMILY Cullin repeat-like 82 646 IPR016159 -
Lal12g0346 658 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 649 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0346 Lal-Chr12 2483875 2485851 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0346 45 657 EXO70 exocyst subunit family AT5G13150 45.950 0.0 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0346 K07195 - lang:109346462 1158.67