Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0345 ATGGGATCATGCCTCTCTGGTTCTGCTCTTGAATCCGAACCTCTTTCGGATATTGGCAATGGTGGTAATGGGAAGCGGAGAAGGCTCACCACTTCCTCTTCCTTTGATCATAGATTGGAAATGAAATTGCATAGAGTTCCTGGTAGAATCTTCTTGAATGGATCCACCCAAGTTGCATCCTTGTATTGTAAACAAGGCAGAAAAGGAGTCAACCAAGATGCTATGCTTCTTTGGGAGAACTTTTGTTCAAAGGGGGACACTGTTTTTTGTGGTGTTTTTGATGGACATGGACCAAATGGCCACATGGTTTCAAAGAAAGTGAGAGATTCTTTCCCTTTAAGGCTTATTGCTCAGTGGGATTTGCTTAGTAACAATATAGATAGACTCAATGATCTCAGAAGCTCCATAAGTTATGAACCTGAGGAGAATGAATCTACATTGGTTGATGCAAAACCTATTGCCACTGGTCATGAGTTTGATTTCAGAACAATGAGAAAATCTTTTTTGAGGGCTTGTAAGGTTATGGACAAAGAACTGAAATTGCATGATATTGATTGCTATTGCAGTGGAACTACAGCAGTTACCTTGCTGAAGAAGGGGAAGGACCTTGTTATTGGAAACGTTGGAGACTCTAGAGCTGTATTGGGTAGCAGAGATTACAATGGTTCTCTTATTCCTATTCAGTTGACCATTGACCTTAAGCCTAATCTTCCAAGGGAAGTAGAGAGGATCAAGCTTTGTAAGGGAAGAGTGTTTGCCCTAGACAATGAACCTCATATTGCTCGAGTTTGGTTGCCAAACATTGATTGTCCAGGCCTTGCTATGACACGTACTTTTGGAGATTTTTGCCTAAAGGACTTTGGAGTCATCTCAGTTCCTGATGTCACACACCATCACCTTACTCAGAAGGATGAATTTGTTGTGTTAGCAACAGATGGGGTCTGGGATGTTTTATCAAACAAAGAAGTTGTGGATATTGTGGCATCTACTCCACAGTCTTCTGCTGCTCGAACATTGGTTGAGTCAGCTGTCCAAGCATGGAAGAAGAAGCTCCCAACTTGTAAGGTCGATGACTGCTCCGTCGTTTGTCTCTTCTTTAATTCAGATTTCAAGTCATCATGTAACATAGACAACTCAGCATCGCTTGAGCGGGTGATCACCACTACCTGGAGCTAA 1176 0.4209 MGSCLSGSALESEPLSDIGNGGNGKRRRLTTSSSFDHRLEMKLHRVPGRIFLNGSTQVASLYCKQGRKGVNQDAMLLWENFCSKGDTVFCGVFDGHGPNGHMVSKKVRDSFPLRLIAQWDLLSNNIDRLNDLRSSISYEPEENESTLVDAKPIATGHEFDFRTMRKSFLRACKVMDKELKLHDIDCYCSGTTAVTLLKKGKDLVIGNVGDSRAVLGSRDYNGSLIPIQLTIDLKPNLPREVERIKLCKGRVFALDNEPHIARVWLPNIDCPGLAMTRTFGDFCLKDFGVISVPDVTHHHLTQKDEFVVLATDGVWDVLSNKEVVDIVASTPQSSAARTLVESAVQAWKKKLPTCKVDDCSVVCLFFNSDFKSSCNIDNSASLERVITTTWS 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0345 391 CDD PP2Cc 57 366 IPR001932 -
Lal12g0345 391 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 1 377 - -
Lal12g0345 391 SMART PP2C_4 52 364 IPR001932 -
Lal12g0345 391 SUPERFAMILY PP2C-like 54 367 IPR036457 -
Lal12g0345 391 MobiDBLite consensus disorder prediction 1 31 - -
Lal12g0345 391 Gene3D - 53 369 IPR036457 -
Lal12g0345 391 Pfam Protein phosphatase 2C 84 343 IPR001932 -
Lal12g0345 391 ProSiteProfiles PPM-type phosphatase domain profile. 58 366 IPR001932 -
Lal12g0345 391 PANTHER ALPHABET, ISOFORM E-RELATED 1 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0345 Lal-Chr12 2475675 2483058 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0345 1 381 PP2C-type Phosphatase Gene Family AT3G02750 49.324 1.71e-139 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0345 - - gmx:100802479 514.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0345 12 2475675 2483058 Lal12g0345 12 2475675 2483058 ECH