Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0334 ATGAAAGGAGAAAGAGGAAGAGCTTCAATCGTGAATGAAAACGCAGAAGAGGAACAGGAACAAGAACAAGACCCCGCTAGTCGCAGAATCATTCGCTCCCAATTCCTCAAACTCAAATCTCTCATTAACGATAAAAGGGATGACTTGTTGAACACGGATTCAGACAAGTTCGATTCTATCTTGAACCAGTTCAAAATATTGCACGACCAAGTTCAAAAGCCGAGAGAGCAGGTTGCGGATGCTGAGGCGCTGCTGGATTTGACACGCACTCTTGTGGGATCGGTGAAGTCTTTGCTTAATGAGGGCATCACTCCTGCTCAATTTGTCGGCTGTTTGCTGAAAGACTATGGCCAAGAGGGTACTGACAATTCAATCAATTGGAAAAAGCTTGGGATGTCTGTATCCCCCATCTTTATGAATGTTCATGGCTGCTGTACCATGCTTGGTCCCATGGAAAATGAGTTGAAGCAACGTAAAATAGGAGTTCAAAGAAAACAAACAAAGCCAACTGCTGAAAAGGCTAGGCCTGAAGAGCTTGATGAATCCAATGAAATGGAAAAAGCCGATACTGACAAAAACATGATAACTATGTTTAATGTCATGAAGAAGAACACGAAAGGTGTTCGACTTGAAAGCCTAATTTTGAACAGGACATCTTTTGCTCAGACAGTGGAAAACTTGTTTACCCTATCATTTTTAGTTAAAGAAGGTCGTGCTGACATCCGTGTTGACGAAAATCTTTCACACTATGTTGAACCTAGAAATGCTCCGAAGACGCAAGAAACTTATACTCATTTTGTATTCAGATATGATTACCAAGATTGGAAGCTAATGAAGGACATGGTGCCTGAGGGTAAGGAGCTAATGCCACATAGAGGTCAGTTTTCAACAATGGTTGATTCTCAGCCAGAGATGGCTGATGACAATTCTCAATCAGCTTTTTCTGTAACACCTATCAGAAAGTTATCACGGAACCGAGGGCGGATTGTGCAGGAGGAAGGTGTAGTAGAAGAATCTCCTCAATGTGATGAGGAAAATGTTTCCAGAGCAGCTGCAATCCGTAGAAAAATGTCAGAATACACACTAGAGTCCTTCACGGTAGAAAACAAAACTAACGATGGAATTAAGCTCCATACACGGCTTTTCAAACCAGGAAGAGAATCAAAGGATAAAGATGAAAACTTTGCCATAGTTATGGTACACCCATATTCCATTTTGGGTGGTTCTCAGGGTCTCCTAAAAGGAATTGCTTCTTATTTGGCTTCTAATGGTTATGTGGCTGTTACTTTTGACATGAGAGGTGTTGGTAGATCCACTGGGAAACCTTCTATTACTGGTTTTGCTGAAGTTAAGGATGTTGTTGCTGTCTGCAATTGGGTCTCTGATTTTCTCTCTCTCAATAGGATCTTGTTGGTGGGTTCTTCTGCAGGTGCACCTATAGCAGGTTCTGCAGTGGATCAGATTGAACAAGTGATTGGGTATGTAAGCATAGGTTATCCATTTGGCATGACTGCCTCAATCCTATTTGGAAGACACCACAAAGCTATTTTACAGTCCTCAAAACCAAAACTCTTCATTATGGGAACACAAGATGGATTCACAAGTGTAAAGCAGCTTAAAAACAAGCTTAAATCTGCAGCAGGACGTGTCGAAACACATTTAATCGATGGAGTAGGCCACTTCCAAATGGAAGGGCCTGATTTTGATGCTCACATGGTAGACCTCATCATTAAATTTATTGCATCATTGTAA 1752 0.4144 MKGERGRASIVNENAEEEQEQEQDPASRRIIRSQFLKLKSLINDKRDDLLNTDSDKFDSILNQFKILHDQVQKPREQVADAEALLDLTRTLVGSVKSLLNEGITPAQFVGCLLKDYGQEGTDNSINWKKLGMSVSPIFMNVHGCCTMLGPMENELKQRKIGVQRKQTKPTAEKARPEELDESNEMEKADTDKNMITMFNVMKKNTKGVRLESLILNRTSFAQTVENLFTLSFLVKEGRADIRVDENLSHYVEPRNAPKTQETYTHFVFRYDYQDWKLMKDMVPEGKELMPHRGQFSTMVDSQPEMADDNSQSAFSVTPIRKLSRNRGRIVQEEGVVEESPQCDEENVSRAAAIRRKMSEYTLESFTVENKTNDGIKLHTRLFKPGRESKDKDENFAIVMVHPYSILGGSQGLLKGIASYLASNGYVAVTFDMRGVGRSTGKPSITGFAEVKDVVAVCNWVSDFLSLNRILLVGSSAGAPIAGSAVDQIEQVIGYVSIGYPFGMTASILFGRHHKAILQSSKPKLFIMGTQDGFTSVKQLKNKLKSAAGRVETHLIDGVGHFQMEGPDFDAHMVDLIIKFIASL 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0334 583 SUPERFAMILY alpha/beta-Hydrolases 364 581 IPR029058 -
Lal12g0334 583 MobiDBLite consensus disorder prediction 161 186 - -
Lal12g0334 583 PANTHER UNCHARACTERIZED 13 358 IPR027786 GO:0005634|GO:0006281|GO:0030915
Lal12g0334 583 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 13 358 - -
Lal12g0334 583 MobiDBLite consensus disorder prediction 1 26 - -
Lal12g0334 583 Pfam Nse4 C-terminal 208 286 IPR014854 -
Lal12g0334 583 Pfam X-Pro dipeptidyl-peptidase (S15 family) 373 461 IPR000383 GO:0016787
Lal12g0334 583 Gene3D alpha/beta hydrolase 361 566 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0334 Lal-Chr12 2381687 2391905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0334 26 354 Non-SMC Element family AT1G51130 50.867 5.02e-107 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0334 K22825 - gmx:100792117 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0334 12 2381687 2391905 Lal13g0319 13 2010075 2012577 LSH