Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal12g0332 TTTGCATCAATCCTAAGCTTCACAAACCAAACAAACAAAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATTCATTCATTTGCATCCTTCAATCACTGAAATTCAAACAAACCCTAATTACAAAAAAGGCACACATTTCTCCTCCTGGTTACTTTGTCCGCCTGGAGAATTCAACTCGTAGCAAAGACGATTTACATTTGAATAAGAAGACAAGGATGCGTAGGTGGCTTTGCTGTACTTGTCAGGTGGAGGAGTCTTACCCATCAAATGAAAATGAGCACCTGAAAAGCCCAGGGAATTATGGAGATGGCTACCACAAAGGCTCAAAGACATCAGCTCCTATCAAACCTGAAACACAAAAGGCACCACCACCCATTGAAGTTCCAGCATTATCTTTAGATGAGCTAAAGGAAAAGACTGATAACTTCGGATCAAAGGCATTGATTGGTGAAGGATCATATGGAAGGGTGTATTATGCAACCTTGAACAATGGAAAAGTTGTGGCTGTGAAAAAGCTTGATGTTTCCGTGGTCTCGAGATTGAAAAATGACAATTTTGTTGAGTTGCAAGGTTATTGTGTTGAAGGAAATCTCCGTGTACTTGCATATGAGTTTGCTACTATGGGCTCTCTTCATGACATATTGCATGGTAGAAAGGGAGTTCAAGGGGCACAACCAGGGCCAACTCTTGATTGGATACAACGAGTTAGAATTGCAGTTGATGCAGCAAGGGGATTAGAATATTTACACGAGAAAGTTCAACCACCTGTTATTCACAGAGATATCAGATCCAGTAATGTGCTTATCTTTGAAGATTACAAGGCTAAGATAGCTGATTTTAACCTCTCAAATCAGGCTCCTGACATGGCTGCACGCCTTCATTCCACTCGAGTGCTCGGAACTTTTGGGTATCATGCTCCAGAATATGCAATGACTGGCCAGTTGACTCAGAAGAGTGATGTCTACAGTTTTGGTGTTGTTCTTCTTGAACTTCTTACAGGAAGAAAACCTGTTGATCATACCATGCCTCGCGGACAGCAAAGTCTTGTCACATGGGCTACCCCAAGGTTAAGTGAGGATAAAGTTAAACAATGTGTCGACCCAAAATTGAAAGGAGAATACCCCCCTAAAGGAGTTGCTAAGCTTGCAGCTGTTGCAGCACTGTGTGTGCAGTATGAAGCAGAGTTTAGGCCAAATATGAGCATTGTAGTTAAAGCACTCCAACCACTTCTGAAGGCTCCTGCTCCTGCTCCTGCTCCTGCTGCCCCAGAAAGTTGA 1278 0.4272 FASILSFTNQTNKTLSLSLSLSLYSFICILQSLKFKQTLITKKAHISPPGYFVRLENSTRSKDDLHLNKKTRMRRWLCCTCQVEESYPSNENEHLKSPGNYGDGYHKGSKTSAPIKPETQKAPPPIEVPALSLDELKEKTDNFGSKALIGEGSYGRVYYATLNNGKVVAVKKLDVSVVSRLKNDNFVELQGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWIQRVRIAVDAARGLEYLHEKVQPPVIHRDIRSSNVLIFEDYKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKAPAPAPAPAAPES 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal12g0332 425 Pfam Protein tyrosine and serine/threonine kinase 148 407 IPR001245 GO:0004672|GO:0006468
Lal12g0332 425 MobiDBLite consensus disorder prediction 89 126 - -
Lal12g0332 425 Gene3D Transferase(Phosphotransferase) domain 1 207 415 - -
Lal12g0332 425 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 3 ISOFORM X2 59 420 - -
Lal12g0332 425 ProSiteProfiles Protein kinase domain profile. 143 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal12g0332 425 Gene3D Phosphorylase Kinase; domain 1 109 205 - -
Lal12g0332 425 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 59 420 - -
Lal12g0332 425 SUPERFAMILY Protein kinase-like (PK-like) 123 407 IPR011009 -
Lal12g0332 425 ProSitePatterns Tyrosine protein kinases specific active-site signature. 257 269 IPR008266 GO:0004672|GO:0006468
Lal12g0332 425 ProSitePatterns Protein kinases ATP-binding region signature. 149 172 IPR017441 GO:0005524
Lal12g0332 425 SMART tyrkin_6 143 407 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal12g0332 Lal-Chr12 2372603 2376301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal12g0332 116 412 Receptor kinase-like Gene Family AT3G58690 46.326 4.77e-88 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Lal12g0332 PK_Tyr_Ser-Thr 1.6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal12g0332 K13436 - mnt:21407434 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0332 12 2372603 2376301 Lal12g0332 12 2372603 2376301 ECH
Lal12g0332 12 2372603 2376301 Lal24g0256 24 1818916 1824251 LSH